Information for 13-ACACAGTCMCTTT (Motif 27)

C G T A G T A C C G T A A G T C C G T A A T C G C G A T A T G C T G A C A G T C A G C T A C G T G A C T
Reverse Opposite:
C T G A T G C A C T G A A C T G A C T G A T C G C G T A A T G C C G A T A C T G A C G T A C T G A C G T
p-value:1e-7
log p-value:-1.786e+01
Information Content per bp:1.771
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif19.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets56.3 +/- 23.0bp
Average Position of motif in Background49.0 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACACAGTCMCTTT--
TCACTTTCACTTTCN
 C G T A G T A C C G T A A G T C C G T A A T C G C G A T A T G C T G A C A G T C A G C T A C G T G A C T A C G T A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ACACAGTCMCTTT-
--ACTTTCACTTTC
 C G T A G T A C C G T A A G T C C G T A A T C G C G A T A T G C T G A C A G T C A G C T A C G T G A C T A C G T
A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACACAGTCMCTTT
GHTACAWTGTADCHR-
 A C G T A C G T A C G T C G T A G T A C C G T A A G T C C G T A A T C G C G A T A T G C T G A C A G T C A G C T A C G T G A C T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACACAGTCMCTTT
ACAAAGGNBCCT-
 C G T A G T A C C G T A A G T C C G T A A T C G C G A T A T G C T G A C A G T C A G C T A C G T G A C T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACACAGTCMCTTT
GHWACAWTGTWDCWA-
 A C G T A C G T A C G T C G T A G T A C C G T A A G T C C G T A A T C G C G A T A T G C T G A C A G T C A G C T A C G T G A C T
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACACAGTCMCTTT
ACAAAG-------
 C G T A G T A C C G T A A G T C C G T A A T C G C G A T A T G C T G A C A G T C A G C T A C G T G A C T
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------ACACAGTCMCTTT
AGCGGCACACACGCAA---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G T A A G T C C G T A A T C G C G A T A T G C T G A C A G T C A G C T A C G T G A C T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ACACAGTCMCTTT
GGACACACCCCC---
 A C G T A C G T C G T A G T A C C G T A A G T C C G T A A T C G C G A T A T G C T G A C A G T C A G C T A C G T G A C T
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ACACAGTCMCTTT-
--ACTTTCACTTTC
 C G T A G T A C C G T A A G T C C G T A A T C G C G A T A T G C T G A C A G T C A G C T A C G T G A C T A C G T
A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ACACAGTCMCTTT-
ATGTACAGTAGCAAAG
 A C G T A C G T C G T A G T A C C G T A A G T C C G T A A T C G C G A T A T G C T G A C A G T C A G C T A C G T G A C T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G