p-value: | 1e-8 |
log p-value: | -1.897e+01 |
Information Content per bp: | 1.925 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.85% |
Number of Background Sequences with motif | 9.4 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 54.0 +/- 22.3bp |
Average Position of motif in Background | 40.9 +/- 17.4bp |
Strand Bias (log2 ratio + to - strand density) | -2.6 |
Multiplicity (# of sites on avg that occur together) | 1.17 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORA/MA0071.1/Jaspar
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCGTGACCTGTAT ---TGACCTTGAT |
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PB0049.1_Nr2f2_1/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCGTGACCTGTAT-- NNNNTGACCTTTNNNN |
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PB0053.1_Rara_1/Jaspar
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCGTGACCTGTAT-- NNNGTGACCTTTGNNN |
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RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 4 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCGTGACCTGTAT TGACCTTGACCT---- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 5 |
Score: | 0.65 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCGTGACCTGTAT ---TGACCT---- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCGTGACCTGTAT --GTGACCTT--- |
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NR2F1/MA0017.2/Jaspar
Match Rank: | 7 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCGTGACCTGTAT CNNTTGACCTTTG- |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCGTGACCTGTAT ---TGACCTARTT |
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RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
Match Rank: | 9 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCGTGACCTGTAT TGACCTTGACCT---- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 10 |
Score: | 0.64 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCGTGACCTGTAT ---TGACCTYA-- |
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