p-value: | 1e-9 |
log p-value: | -2.231e+01 |
Information Content per bp: | 1.788 |
Number of Target Sequences with motif | 20.0 |
Percentage of Target Sequences with motif | 2.82% |
Number of Background Sequences with motif | 223.0 |
Percentage of Background Sequences with motif | 0.45% |
Average Position of motif in Targets | 34.8 +/- 26.6bp |
Average Position of motif in Background | 51.5 +/- 26.8bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0048.1_Hoxa13/Jaspar
Match Rank: | 1 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ATTTAGGAAG--- ANATTTTACGAGNNNN |
|
|
|
PH0068.1_Hoxc13/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ATTTAGGAAG--- NAATTTTACGAGNTNN |
|
|
|
HOXC13/MA0907.1/Jaspar
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ATTTAGGAAG NTTTTACGAGN |
|
|
|
HOXC10/MA0905.1/Jaspar
Match Rank: | 4 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ATTTAGGAAG NTTTTACGAC- |
|
|
|
HOXD11/MA0908.1/Jaspar
Match Rank: | 5 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ATTTAGGAAG NTTTTACGAC- |
|
|
|
Bcl6/MA0463.1/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----ATTTAGGAAG NGCTTTCTAGGAAN |
|
|
|
POL008.1_DCE_S_I/Jaspar
Match Rank: | 7 |
Score: | 0.64 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | ATTTAGGAAG- -----NGAAGC |
|
|
|
PB0162.1_Sfpi1_2/Jaspar
Match Rank: | 8 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ATTTAGGAAG- CAAATTCCGGAACC |
|
|
|
PH0065.1_Hoxc10/Jaspar
Match Rank: | 9 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ATTTAGGAAG--- ANNTTTTACGACNTNN |
|
|
|
PH0077.1_Hoxd12/Jaspar
Match Rank: | 10 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----ATTTAGGAAG--- NNNATTTTACGACNNTN |
|
|
|