Information for 10-GCCAAAGATC (Motif 39)

A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C T G A C T G A G T C
p-value:1e-4
log p-value:-1.126e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.3 +/- 10.1bp
Average Position of motif in Background35.7 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAAGATC
TGCCAA-----
 A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GCCAAAGATC
CGTGCCAAG----
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCCAAAGATC-
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Nr2f6/MA0677.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCCAAAGATC-
GAGGTCAAAGGTCA
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCCAAAGATC-
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCCAAAGATC-
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRB/MA0855.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCCAAAGATC-
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCCAAAGATC-
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCCAAAGATC-
TGGGGCAAAGGTCA
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCAAAGATC-
GGCCATAAATCA
 A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C T G C G T A A C G T A G T C A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A