Information for 9-GTCTCGCTGT (Motif 37)

A C T G A C G T A G T C A C G T A G T C A C T G A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G T A A G T C
p-value:1e-5
log p-value:-1.247e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 24.7bp
Average Position of motif in Background64.9 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GTCTCGCTGT-
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C T G A G T C A C G T A C T G A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GTCTCGCTGT-
-----GCTGTG
 A C T G A C G T A G T C A C G T A G T C A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTCTCGCTGT----
NNTCCTGCTGTGNNN
 A C G T A C T G A C G T A G T C A C G T A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0036.1_Irf6_1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GTCTCGCTGT-
NNNTTGGTTTCGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C T G A G T C A C G T A C T G A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCTCGCTGT
CTGTCTGG----
 A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C T G A G T C A C G T A C T G A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTCTCGCTGT--
NTGGTTTCGGTTNNN
 A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTCTCGCTGT--
--CCTGCTGAGH
 A C T G A C G T A G T C A C G T A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GTCTCGCTGT-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C T G A G T C A C G T A C T G A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

IRF2/MA0051.1/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GTCTCGCTGT--
GTTTTGCTTTCACTTTCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTCTCGCTGT
----NGCTN-
 A C T G A C G T A G T C A C G T A G T C A C T G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T