Information for 4-GGTCAGCGCC (Motif 32)

A C T G A C T G G A C T A T G C C T G A A T C G A G T C T A C G A G T C A G T C
Reverse Opposite:
T C A G A C T G A T G C T C A G A T G C A G C T A T C G C T G A A G T C A G T C
p-value:1e-7
log p-value:-1.712e+01
Information Content per bp:1.834
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.93%
Number of Background Sequences with motif836.6
Percentage of Background Sequences with motif1.69%
Average Position of motif in Targets48.4 +/- 27.0bp
Average Position of motif in Background51.2 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GGTCAGCGCC-
GARTGGTCATCGCCC
 A C G T A C G T A C G T A C G T A C T G A C T G G A C T A T G C C T G A A T C G A G T C T A C G A G T C A G T C A C G T
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGCGCC
AGGTCA-----
 A C G T A C T G A C T G G A C T A T G C C T G A A T C G A G T C T A C G A G T C A G T C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGTCAGCGCC--
RGTTAGTGCCCY
 A C T G A C T G G A C T A T G C C T G A A T C G A G T C T A C G A G T C A G T C A C G T A C G T
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGCGCC
AGRGGTCA-----
 A C G T A C G T A C G T A C T G A C T G G A C T A T G C C T G A A T C G A G T C T A C G A G T C A G T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGCGCC
TRAGGTCA-----
 A C G T A C G T A C G T A C T G A C T G G A C T A T G C C T G A A T C G A G T C T A C G A G T C A G T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGTCAGCGCC
TGAGTCAGCA--
 A C G T A C G T A C T G A C T G G A C T A T G C C T G A A T C G A G T C T A C G A G T C A G T C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GGTCAGCGCC
ATCAAGGTCA-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G G A C T A T G C C T G A A T C G A G T C T A C G A G T C A G T C
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGTCAGCGCC--
-GTCAGCANNTN
 A C T G A C T G G A C T A T G C C T G A A T C G A G T C T A C G A G T C A G T C A C G T A C G T
A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGTCAGCGCC
CAAAGGTCAG----
 A C G T A C G T A C G T A C G T A C T G A C T G G A C T A T G C C T G A A T C G A G T C T A C G A G T C A G T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGCGCC---
AGGTCANTGACCTN
 A C G T A C T G A C T G G A C T A T G C C T G A A T C G A G T C T A C G A G T C A G T C A C G T A C G T A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C