Information for 1-ATGCCCACAA (Motif 17)

C G T A A G C T A T C G G T A C A G T C G T A C C G T A T A G C G C T A G C T A
Reverse Opposite:
C G A T C G A T A T C G A C G T A C T G A C T G A C T G A T G C C T G A C G A T
p-value:1e-10
log p-value:-2.478e+01
Information Content per bp:1.838
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif94.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets55.6 +/- 25.2bp
Average Position of motif in Background50.6 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:ATGCCCACAA
ATGCCCACC-
 C G T A A G C T A T C G G T A C A G T C G T A C C G T A T A G C G C T A G C T A
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----ATGCCCACAA--
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T C G T A A G C T A T C G G T A C A G T C G T A C C G T A T A G C G C T A G C T A A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ATGCCCACAA
ATGCCAACC-
 C G T A A G C T A T C G G T A C A G T C G T A C C G T A T A G C G C T A G C T A
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATGCCCACAA
CTGCCCGCA-
 C G T A A G C T A T C G G T A C A G T C G T A C C G T A T A G C G C T A G C T A
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATGCCCACAA-
-TGCCCAGNHW
 C G T A A G C T A T C G G T A C A G T C G T A C C G T A T A G C G C T A G C T A A C G T
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATGCCCACAA----
CGAAGCACACAAAATA
 A C G T A C G T C G T A A G C T A T C G G T A C A G T C G T A C C G T A T A G C G C T A G C T A A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATGCCCACAA--
NWAACCACADNN
 C G T A A G C T A T C G G T A C A G T C G T A C C G T A T A G C G C T A G C T A A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATGCCCACAA
GGTGCCAAGT-
 A C G T C G T A A G C T A T C G G T A C A G T C G T A C C G T A T A G C G C T A G C T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATGCCCACAA---
ACTATGCCAACCTACC
 A C G T A C G T A C G T C G T A A G C T A T C G G T A C A G T C G T A C C G T A T A G C G C T A G C T A A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

SP8/MA0747.1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATGCCCACAA
GCCACGCCCACT-
 A C G T A C G T A C G T C G T A A G C T A T C G G T A C A G T C G T A C C G T A T A G C G C T A G C T A
T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T A C G T