Information for 4-AGGAAGCTVCTGCCTC (Motif 9)

C T G A C T A G C T A G G T C A C G T A A C T G A T G C A G C T T A G C A G T C C G A T A C T G A G T C A G T C A G C T A T G C
Reverse Opposite:
A T C G C T G A A C T G C T A G G T A C C G T A A C T G A T C G C T G A A T C G A G T C A C G T A C G T A G T C A G T C A G C T
p-value:1e-13
log p-value:-3.009e+01
Information Content per bp:1.813
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.1 +/- 22.4bp
Average Position of motif in Background8.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGGAAGCTVCTGCCTC
-AGATGCTRCTRCCHT
 C T G A C T A G C T A G G T C A C G T A A C T G A T G C A G C T T A G C A G T C C G A T A C T G A G T C A G T C A G C T A T G C
A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGGAAGCTVCTGCCTC
---CAGCTGTTTCCT-
 C T G A C T A G C T A G G T C A C G T A A C T G A T G C A G C T T A G C A G T C C G A T A C T G A G T C A G T C A G C T A T G C
A C G T A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGGAAGCTVCTGCCTC
-AGCAGCTGCTNN---
 C T G A C T A G C T A G G T C A C G T A A C T G A T G C A G C T T A G C A G T C C G A T A C T G A G T C A G T C A G C T A T G C
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGAAGCTVCTGCCTC
-AGCAGCTGCT-----
 C T G A C T A G C T A G G T C A C G T A A C T G A T G C A G C T T A G C A G T C C G A T A C T G A G T C A G T C A G C T A T G C
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGAAGCTVCTGCCTC
-NGAAGC---------
 C T G A C T A G C T A G G T C A C G T A A C T G A T G C A G C T T A G C A G T C C G A T A C T G A G T C A G T C A G C T A T G C
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGGAAGCTVCTGCCTC
-GACAGCTGCAG----
 C T G A C T A G C T A G G T C A C G T A A C T G A T G C A G C T T A G C A G T C C G A T A C T G A G T C A G T C A G C T A T G C
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGAAGCTVCTGCCTC
-CGCAGCTGCG-----
 C T G A C T A G C T A G G T C A C G T A A C T G A T G C A G C T T A G C A G T C C G A T A C T G A G T C A G T C A G C T A T G C
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGGAAGCTVCTGCCTC
--NCAGCTGCTG----
 C T G A C T A G C T A G G T C A C G T A A C T G A T G C A G C T T A G C A G T C C G A T A C T G A G T C A G T C A G C T A T G C
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGGAAGCTVCTGCCTC
NNNNAGCAGCTGCTGAN--
 A C G T A C G T A C G T C T G A C T A G C T A G G T C A C G T A A C T G A T G C A G C T T A G C A G T C C G A T A C T G A G T C A G T C A G C T A T G C
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGAAGCTVCTGCCTC
-AACAGCTGCAG----
 C T G A C T A G C T A G G T C A C G T A A C T G A T G C A G C T T A G C A G T C C G A T A C T G A G T C A G T C A G C T A T G C
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T