p-value: | 1e-9 |
log p-value: | -2.246e+01 |
Information Content per bp: | 1.682 |
Number of Target Sequences with motif | 15.0 |
Percentage of Target Sequences with motif | 2.09% |
Number of Background Sequences with motif | 18.8 |
Percentage of Background Sequences with motif | 0.23% |
Average Position of motif in Targets | 43.7 +/- 25.2bp |
Average Position of motif in Background | 50.5 +/- 28.9bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0166.1_Sox12_2/Jaspar
Match Rank: | 1 |
Score: | 0.70 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GACAATGGAATTC AAACAGACAAAGGAAT-- |
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Sox2/MA0143.3/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GACAATGGAATTC AACAAAGG----- |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 3 |
Score: | 0.68 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GACAATGGAATTC AATGAACAATGGAATT- |
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TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 4 |
Score: | 0.68 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GACAATGGAATTC ---NCTGGAATGC |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 5 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GACAATGGAATTC RACAAWGG----- |
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PB0169.1_Sox15_2/Jaspar
Match Rank: | 6 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GACAATGGAATTC-- TTGAATGAAATTCGA |
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Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 7 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GACAATGGAATTC VRRACAAWGG----- |
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Sox6/MA0515.1/Jaspar
Match Rank: | 8 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GACAATGGAATTC AAAACAATGG----- |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 9 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GACAATGGAATTC GAACAATGGN---- |
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Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 10 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GACAATGGAATTC VRAACAATGG----- |
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