Information for 4-AGCTGCATAA (Motif 18)

C T G A C T A G A T G C C A G T A C T G A G T C C G T A A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T G T C A A C G T A C T G A G T C G C T A A T C G A G T C A G C T
p-value:1e-10
log p-value:-2.368e+01
Information Content per bp:1.869
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets48.1 +/- 25.0bp
Average Position of motif in Background48.4 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AGCTGCATAA----
CAATTGCAAAAATAT
 A C G T C T G A C T A G A T G C C A G T A C T G A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

PH0148.1_Pou3f3/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCATAA----
AAAATATGCATAATAAA
 A C G T A C G T A C G T C T G A C T A G A T G C C A G T A C T G A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGCTGCATAA-
-VTTRCATAAY
 C T G A C T A G A T G C C A G T A C T G A G T C C G T A A C G T C G T A C G T A A C G T
A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGCTGCATAA
ATTTGCATAA
 C T G A C T A G A T G C C A G T A C T G A G T C C G T A A C G T C G T A C G T A
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

CEBPA/MA0102.3/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGCTGCATAA--
-ATTGCACAATA
 C T G A C T A G A T G C C A G T A C T G A G T C C G T A A C G T C G T A C G T A A C G T A C G T
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

POU3F4/MA0789.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGCTGCATAA
ATTTGCATA-
 C T G A C T A G A T G C C A G T A C T G A G T C C G T A A C G T C G T A C G T A
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGCTGCATAA
TAATTTGCATAA
 A C G T A C G T C T G A C T A G A T G C C A G T A C T G A G T C C G T A A C G T C G T A C G T A
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

POU2F1/MA0785.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGCTGCATAA-
AATTTGCATANT
 A C G T C T G A C T A G A T G C C A G T A C T G A G T C C G T A A C G T C G T A C G T A A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGCATAA--
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T C T G A C T A G A T G C C A G T A C T G A G T C C G T A A C G T C G T A C G T A A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGCATAA--
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T C T G A C T A G A T G C C A G T A C T G A G T C C G T A A C G T C G T A C G T A A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A