Information for 10-CTGTSAGTCACYCCMM (Motif 16)

A G T C A C G T A T C G A C G T A T G C C G T A A C T G A C G T A G T C C G T A A G T C A G T C A G T C G T A C G T A C G T C A
Reverse Opposite:
C A G T A C T G A C T G A C T G C T A G C T A G A C G T A C T G G T C A A G T C C G A T A T C G C G T A A T G C C G T A C T A G
p-value:1e-9
log p-value:-2.156e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 21.2bp
Average Position of motif in Background53.9 +/- 4.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CTGTSAGTCACYCCMM
NCTGTCAATCAN-----
 A C G T A G T C A C G T A T C G A C G T A T G C C G T A A C T G A C G T A G T C C G T A A G T C A G T C A G T C G T A C G T A C G T C A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CTGTSAGTCACYCCMM
SCTGTCAVTCAV-----
 A C G T A G T C A C G T A T C G A C G T A T G C C G T A A C T G A C G T A G T C C G T A A G T C A G T C A G T C G T A C G T A C G T C A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CTGTSAGTCACYCCMM
GSCTGTCACTCA------
 A C G T A C G T A G T C A C G T A T C G A C G T A T G C C G T A A C T G A C G T A G T C C G T A A G T C A G T C A G T C G T A C G T A C G T C A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTGTSAGTCACYCCMM
--NTGAGTCATCN---
 A G T C A C G T A T C G A C G T A T G C C G T A A C T G A C G T A G T C C G T A A G T C A G T C A G T C G T A C G T A C G T C A
A C G T A C G T T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C A C G T A C G T A C G T

JUNB/MA0490.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTGTSAGTCACYCCMM
--ATGAGTCATCN---
 A G T C A C G T A T C G A C G T A T G C C G T A A C T G A C G T A G T C C G T A A G T C A G T C A G T C G T A C G T A C G T C A
A C G T A C G T T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C A C G T A C G T A C G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTGTSAGTCACYCCMM
--ATGAGTCATNTNNT
 A G T C A C G T A T C G A C G T A T G C C G T A A C T G A C G T A G T C C G T A A G T C A G T C A G T C G T A C G T A C G T C A
A C G T A C G T T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T

FOS::JUN/MA0099.2/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTGTSAGTCACYCCMM
---TGAGTCA------
 A G T C A C G T A T C G A C G T A T G C C G T A A C T G A C G T A G T C C G T A A G T C A G T C A G T C G T A C G T A C G T C A
A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGTSAGTCACYCCMM
-NATGAGTCACC----
 A G T C A C G T A T C G A C G T A T G C C G T A A C T G A C G T A G T C C G T A A G T C A G T C A G T C G T A C G T A C G T C A
A C G T A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CTGTSAGTCACYCCMM
----CNGTCACGCCAC
 A G T C A C G T A T C G A C G T A T G C C G T A A C T G A C G T A G T C C G T A A G T C A G T C A G T C G T A C G T A C G T C A
A C G T A C G T A C G T A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

PB0142.1_Jundm2_2/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTGTSAGTCACYCCMM
NNGGTGACTCATCANN-
 A C G T A G T C A C G T A T C G A C G T A T G C C G T A A C T G A C G T A G T C C G T A A G T C A G T C A G T C G T A C G T A C G T C A
C A G T G A C T C A T G T C A G A G C T A C T G C G T A A T G C C A G T T G A C C T G A A G C T G A T C T G C A G T C A A C G T A C G T