Information for 7-AATTTGGCAGGGG (Motif 9)

C G T A C G T A A C G T A C G T A C G T A C T G A T C G A G T C C G T A A C T G A C T G A C T G A T C G
Reverse Opposite:
A T G C A G T C A G T C A G T C C G A T A C T G A T G C A G T C C G T A G T C A C G T A A C G T A C G T
p-value:1e-11
log p-value:-2.736e+01
Information Content per bp:1.940
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.5 +/- 24.3bp
Average Position of motif in Background63.2 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AATTTGGCAGGGG
-NNTTGGCANN--
 C G T A C G T A A C G T A C G T A C G T A C T G A T C G A G T C C G T A A C T G A C T G A C T G A T C G
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:AATTTGGCAGGGG---
----TGTCAGGGGGCG
 C G T A C G T A A C G T A C G T A C G T A C T G A T C G A G T C C G T A A C T G A C T G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AATTTGGCAGGGG
--NTTGGCANN--
 C G T A C G T A A C G T A C G T A C G T A C T G A T C G A G T C C G T A A C T G A C T G A C T G A T C G
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AATTTGGCAGGGG
---TTGGCA----
 C G T A C G T A A C G T A C G T A C G T A C T G A T C G A G T C C G T A A C T G A C T G A C T G A T C G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AATTTGGCAGGGG
--CTTGGCAA---
 C G T A C G T A A C G T A C G T A C G T A C T G A T C G A G T C C G T A A C T G A C T G A C T G A T C G
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AATTTGGCAGGGG
NNAATTAGTCACGGT
 A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C T G A T C G A G T C C G T A A C T G A C T G A C T G A T C G
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AATTTGGCAGGGG---
NAGANTGGCGGGGNGNA
 A C G T C G T A C G T A A C G T A C G T A C G T A C T G A T C G A G T C C G T A A C T G A C T G A C T G A T C G A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AATTTGGCAGGGG
-----GGGGGGGG
 C G T A C G T A A C G T A C G T A C G T A C T G A T C G A G T C C G T A A C T G A C T G A C T G A T C G
A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AATTTGGCAGGGG
---TTGACAGC--
 C G T A C G T A A C G T A C G T A C G T A C T G A T C G A G T C C G T A A C T G A C T G A C T G A T C G
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AATTTGGCAGGGG-
--TTTGGCGGGAAA
 C G T A C G T A A C G T A C G T A C G T A C T G A T C G A G T C C G T A A C T G A C T G A C T G A T C G A C G T
A C G T A C G T C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A