Information for 15-TGCTATGAAC (Motif 29)

A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A G T C C G T A A C G T C G T A A C T G A G T C C G T A
p-value:1e-4
log p-value:-1.013e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 25.7bp
Average Position of motif in Background22.9 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0055.1_Rfx4_1/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTATGAAC
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A C G T A A G T C
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTATGAAC
NCCGTTGCTANGNGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A C G T A A G T C
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGCTATGAAC-
-CCTTTGATGT
 A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A C G T A A G T C A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGCTATGAAC--
NNTNTCATGAATGT
 A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGCTATGAAC-
TTTCTNAGAAAN
 A C G T A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A C G T A A G T C A C G T
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGCTATGAAC----
NNTTCCTTTGATCTNNA
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.58
Offset:-9
Orientation:reverse strand
Alignment:---------TGCTATGAAC----
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGCTATGAAC---
TNCCTTTGATCTTN
 A C G T A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGCTATGAAC----
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGCTATGAAC
CTGTTGCTAGGS--
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A C G T A A G T C
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T