p-value: | 1e-6 |
log p-value: | -1.425e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.40% |
Number of Background Sequences with motif | 1.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 39.0 +/- 10.8bp |
Average Position of motif in Background | 67.8 +/- 9.9bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0165.1_Sox11_2/Jaspar
Match Rank: | 1 |
Score: | 0.84 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TAAAATTGTT----- -AAAATTGTTATGAA |
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PB0175.1_Sox4_2/Jaspar
Match Rank: | 2 |
Score: | 0.83 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TAAAATTGTT----- GGAAAAATTGTTAGGAA |
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PB0067.1_Sox18_1/Jaspar
Match Rank: | 3 |
Score: | 0.78 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TAAAATTGTT------ TTCAATTGTTCTAAAA |
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Sox5/MA0087.1/Jaspar
Match Rank: | 4 |
Score: | 0.77 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TAAAATTGTT- ----ATTGTTA |
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PB0172.1_Sox1_2/Jaspar
Match Rank: | 5 |
Score: | 0.76 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TAAAATTGTT---- CTATAATTGTTAGCG |
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PB0063.1_Sox13_1/Jaspar
Match Rank: | 6 |
Score: | 0.76 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TAAAATTGTT----- AANTTATTGTTCTNNA |
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MF0011.1_HMG_class/Jaspar
Match Rank: | 7 |
Score: | 0.74 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TAAAATTGTT ----ATTGTT |
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PB0072.1_Sox5_1/Jaspar
Match Rank: | 8 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TAAAATTGTT----- NNTTTATTGTTCTNNN |
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PB0066.1_Sox17_1/Jaspar
Match Rank: | 9 |
Score: | 0.73 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TAAAATTGTT--- NNATNAATTGTTTNN |
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SRY/MA0084.1/Jaspar
Match Rank: | 10 |
Score: | 0.72 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TAAAATTGTT--- ----ATTGTTTAN |
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