Information for 15-TCTGCCTTGSTYT (Motif 22)

A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C T G A T G C A C G T A G T C A C G T
Reverse Opposite:
C G T A C T A G C G T A A T C G A G T C C G T A C G T A A C T G C T A G A G T C G T C A A C T G C G T A
p-value:1e-8
log p-value:-2.009e+01
Information Content per bp:1.911
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 35.0bp
Average Position of motif in Background57.9 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCTGCCTTGSTYT
GGTCTGGCAT-----
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C T G A T G C A C G T A G T C A C G T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TCTGCCTTGSTYT-
----CCTTTGTTTT
 A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C T G A T G C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCCTTGSTYT---
NNNTCCTTTGTTCTNNN
 A C G T A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C T G A T G C A C G T A G T C A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCCTTGSTYT
BNTGDCCTTG----
 A C G T A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C T G A T G C A C G T A G T C A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TCTGCCTTGSTYT
----CCTTTGTT-
 A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C T G A T G C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TCTGCCTTGSTYT---
ATTTCCTTTGATCTATA
 A C G T A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C T G A T G C A C G T A G T C A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TCTGCCTTGSTYT--
---CCTTTGATCTTT
 A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C T G A T G C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TCTGCCTTGSTYT--
AACCCTTTGATCTTT
 A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C T G A T G C A C G T A G T C A C G T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----TCTGCCTTGSTYT
VBSYGTCTGG--------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C T G A T G C A C G T A G T C A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TCTGCCTTGSTYT----
-ANTCCTTTGTCTNNNN
 A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C T G A T G C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T