Information for 14-GTWCTTGGSTTTG (Motif 20)

A C T G A C G T C G T A A G T C A C G T A C G T A C T G A C T G A T G C A C G T A C G T C G A T A C T G
Reverse Opposite:
A G T C C G T A G T C A C G T A A T C G A G T C A G T C C G T A C G T A A C T G G C A T C G T A A G T C
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.6 +/- 28.9bp
Average Position of motif in Background49.2 +/- 6.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GTWCTTGGSTTTG
TTCNAAGTACTTNNNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C T G A C T G A T G C A C G T A C G T C G A T A C T G
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTWCTTGGSTTTG
NNACTTGCCTT--
 A C T G A C G T C G T A A G T C A C G T A C G T A C T G A C T G A T G C A C G T A C G T C G A T A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTWCTTGGSTTTG
----TTGGCA---
 A C T G A C G T C G T A A G T C A C G T A C G T A C T G A C T G A T G C A C G T A C G T C G A T A C T G
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GTWCTTGGSTTTG
----TTGACTTTT
 A C T G A C G T C G T A A G T C A C G T A C G T A C T G A C T G A T G C A C G T A C G T C G A T A C T G
A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTWCTTGGSTTTG
CTGTTCCTGG-----
 A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C T G A C T G A T G C A C G T A C G T C G A T A C T G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTWCTTGGSTTTG
---NTTGGCANN-
 A C T G A C G T C G T A A G T C A C G T A C G T A C T G A C T G A T G C A C G T A C G T C G A T A C T G
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GTWCTTGGSTTTG
TAAACTAATTAGCTTTG
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C T G A C T G A T G C A C G T A C G T C G A T A C T G
C A G T G T C A C G T A T C G A A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A T G C A C G T C G A T A C G T C T A G

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTWCTTGGSTTTG
-TGATTGGCTANN
 A C T G A C G T C G T A A G T C A C G T A C G T A C T G A C T G A T G C A C G T A C G T C G A T A C T G
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GTWCTTGGSTTTG--
-----TGGGTGTGGC
 A C T G A C G T C G T A A G T C A C G T A C G T A C T G A C T G A T G C A C G T A C G T C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GTWCTTGGSTTTG
---BNTGDCCTTG
 A C T G A C G T C G T A A G T C A C G T A C G T A C T G A C T G A T G C A C G T A C G T C G A T A C T G
A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G