Information for 17-AAANCASACAMATATG (Motif 18)

C T G A G C T A C G T A A G T C A G T C G T C A A T G C C G T A G T A C C G T A T G C A T G C A A G C T C G T A C G A T A T C G
Reverse Opposite:
T A G C G C T A C G A T C T G A A C G T A C G T A C G T A C T G C G A T A T C G A C G T C T A G A C T G G A C T C G A T A G C T
p-value:1e-10
log p-value:-2.346e+01
Information Content per bp:1.682
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif39.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets58.7 +/- 26.7bp
Average Position of motif in Background55.4 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAANCASACAMATATG
CGAAGCACACAAAATA-
 A C G T C T G A G C T A C G T A A G T C A G T C G T C A A T G C C G T A G T A C C G T A T G C A T G C A A G C T C G T A C G A T A T C G
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T

Twist2/MA0633.1/Jaspar

Match Rank:2
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:AAANCASACAMATATG--
--------NACATATGGN
 C T G A G C T A C G T A A G T C A G T C G T C A A T G C C G T A G T A C C G T A T G C A T G C A A G C T C G T A C G A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAANCASACAMATATG
AGCGGCACACACGCAA-
 A C G T C T G A G C T A C G T A A G T C A G T C G T C A A T G C C G T A G T A C C G T A T G C A T G C A A G C T C G T A C G A T A T C G
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAANCASACAMATATG
CAAATCCAGACATCACA-
 A C G T A C G T C T G A G C T A C G T A A G T C A G T C G T C A A T G C C G T A G T A C C G T A T G C A T G C A A G C T C G T A C G A T A T C G
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAANCASACAMATATG
AAACCACAGAN-----
 C T G A G C T A C G T A A G T C A G T C G T C A A T G C C G T A G T A C C G T A T G C A T G C A A G C T C G T A C G A T A T C G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAANCASACAMATATG
AAACCACANN------
 C T G A G C T A C G T A A G T C A G T C G T C A A T G C C G T A G T A C C G T A T G C A T G C A A G C T C G T A C G A T A T C G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:7
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:AAANCASACAMATATG-
---------ACATATGG
 C T G A G C T A C G T A A G T C A G T C G T C A A T G C C G T A G T A C C G T A T G C A T G C A A G C T C G T A C G A T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AAANCASACAMATATG
---CCAGACAG-----
 C T G A G C T A C G T A A G T C A G T C G T C A A T G C C G T A G T A C C G T A T G C A T G C A A G C T C G T A C G A T A T C G
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAANCASACAMATATG
AAAGTAAACAAAAATT
 C T G A G C T A C G T A A G T C A G T C G T C A A T G C C G T A G T A C C G T A T G C A T G C A A G C T C G T A C G A T A T C G
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

BHLHE23/MA0817.1/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AAANCASACAMATATG---
-------AAACATATGTTT
 C T G A G C T A C G T A A G T C A G T C G T C A A T G C C G T A G T A C C G T A T G C A T G C A A G C T C G T A C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T