Information for 5-GAGGGCGCTGCCHDCC (Motif 6)

T C A G C T G A C T A G A T C G A C T G A G T C A C T G A T G C A G C T A T C G A G T C A G T C G A C T C A T G A G T C G T A C
Reverse Opposite:
A C T G C T A G G A T C C G T A C T A G C T A G A T G C C T G A A T C G A G T C A C T G A G T C A T G C A G T C A G C T A G T C
p-value:1e-10
log p-value:-2.467e+01
Information Content per bp:1.735
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif32.3
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets43.5 +/- 22.9bp
Average Position of motif in Background53.7 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGCGCTGCCHDCC
NNNGGGGCGCCCCCNN--
 A C G T A C G T T C A G C T G A C T A G A T C G A C T G A G T C A C T G A T G C A G C T A T C G A G T C A G T C G A C T C A T G A G T C G T A C
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAGGGCGCTGCCHDCC
ATAAGGGCGCGCGAT---
 A C G T A C G T T C A G C T G A C T A G A T C G A C T G A G T C A C T G A T G C A G C T A T C G A G T C A G T C G A C T C A T G A G T C G T A C
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGGGCGCTGCCHDCC
-AGCGCGCC-------
 T C A G C T G A C T A G A T C G A C T G A G T C A C T G A T G C A G C T A T C G A G T C A G T C G A C T C A T G A G T C G T A C
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAGGGCGCTGCCHDCC
ATAAAGGCGCGCGAT---
 A C G T A C G T T C A G C T G A C T A G A T C G A C T G A G T C A C T G A T G C A G C T A T C G A G T C A G T C G A C T C A T G A G T C G T A C
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGGGCGCTGCCHDCC
GGGGGCGGGGCC----
 T C A G C T G A C T A G A T C G A C T G A G T C A C T G A T G C A G C T A T C G A G T C A G T C G A C T C A T G A G T C G T A C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAGGGCGCTGCCHDCC
TGGCGCGCGCGCCTGA--
 A C G T A C G T T C A G C T G A C T A G A T C G A C T G A G T C A C T G A T G C A G C T A T C G A G T C A G T C G A C T C A T G A G T C G T A C
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGCGCTGCCHDCC
NAAGGGGGCGTGGCTTN--
 A C G T A C G T A C G T T C A G C T G A C T A G A T C G A C T G A G T C A C T G A T G C A G C T A T C G A G T C A G T C G A C T C A T G A G T C G T A C
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GAGGGCGCTGCCHDCC
NNNAAGGGGGCGGGNNN----
 A C G T A C G T A C G T A C G T A C G T T C A G C T G A C T A G A T C G A C T G A G T C A C T G A T G C A G C T A T C G A G T C A G T C G A C T C A T G A G T C G T A C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGCGCTGCCHDCC
NNAGGGGCGGGGTNNA--
 A C G T A C G T T C A G C T G A C T A G A T C G A C T G A G T C A C T G A T G C A G C T A T C G A G T C A G T C G A C T C A T G A G T C G T A C
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGGGCGCTGCCHDCC
RGKGGGCGGAGC-----
 A C G T T C A G C T G A C T A G A T C G A C T G A G T C A C T G A T G C A G C T A T C G A G T C A G T C G A C T C A T G A G T C G T A C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T