Information for 8-CAGGTGGTGT (Motif 5)

G T A C C G T A A C T G T A C G A G C T A C T G A T C G G A C T A T C G A G C T
Reverse Opposite:
T C G A T A G C C T G A A T G C A G T C T C G A A T G C A G T C A C G T A C T G
p-value:1e-10
log p-value:-2.469e+01
Information Content per bp:1.830
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif267.0
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets58.6 +/- 17.6bp
Average Position of motif in Background48.2 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FIGLA/MA0820.1/Jaspar

Match Rank:1
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGTGT
AACAGGTGNT--
 A C G T A C G T G T A C C G T A A C T G T A C G A G C T A C T G A T C G G A C T A T C G A G C T
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGTGT
NNCAGGTGNN--
 A C G T A C G T G T A C C G T A A C T G T A C G A G C T A C T G A T C G G A C T A T C G A G C T
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGTGT
NNCAGGTGTN--
 A C G T A C G T G T A C C G T A A C T G T A C G A G C T A C T G A T C G G A C T A T C G A G C T
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGTGT
AACAGATGGC--
 A C G T A C G T G T A C C G T A A C T G T A C G A G C T A C T G A T C G G A C T A T C G A G C T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CAGGTGGTGT
SDGCAGGTGCNS-
 A C G T A C G T A C G T G T A C C G T A A C T G T A C G A G C T A C T G A T C G G A C T A T C G A G C T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CAGGTGGTGT
NNVVCAGCTGBN--
 A C G T A C G T A C G T A C G T G T A C C G T A A C T G T A C G A G C T A C T G A T C G G A C T A T C G A G C T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGTGT
AACAGATGGT--
 A C G T A C G T G T A C C G T A A C T G T A C G A G C T A C T G A T C G G A C T A T C G A G C T
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGGTGT
NNCAGGTGCG--
 A C G T A C G T G T A C C G T A A C T G T A C G A G C T A C T G A T C G G A C T A T C G A G C T
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CAGGTGGTGT
CACGTGNT--
 G T A C C G T A A C T G T A C G A G C T A C T G A T C G G A C T A T C G A G C T
G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CAGGTGGTGT
AACAGGTGT---
 A C G T A C G T G T A C C G T A A C T G T A C G A G C T A C T G A T C G G A C T A T C G A G C T
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T