Information for 6-TGCACTTACTTTC (Motif 4)

A C G T C T A G A G T C C G T A A G T C C G A T A C G T C G T A A G T C A C G T C G A T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A C T G C G A T C G T A C G T A A C T G A C G T A C T G A G T C C G T A
p-value:1e-10
log p-value:-2.515e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 21.4bp
Average Position of motif in Background14.5 +/- 0.3bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------TGCACTTACTTTC
CAGATGTGCACATACGT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G T A A G T C C G A T A C G T C G T A A G T C A C G T C G A T A C G T A G T C
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGCACTTACTTTC
--CACTTCCTCT-
 A C G T C T A G A G T C C G T A A G T C C G A T A C G T C G T A A G T C A C G T C G A T A C G T A G T C
A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCACTTACTTTC
-GCACTTAA----
 A C G T C T A G A G T C C G T A A G T C C G A T A C G T C G T A A G T C A C G T C G A T A C G T A G T C
A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGCACTTACTTTC
--CACTTCCTGT-
 A C G T C T A G A G T C C G T A A G T C C G A T A C G T C G T A A G T C A C G T C G A T A C G T A G T C
A C G T A C G T A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGCACTTACTTTC
-NNACTTACCTN-
 A C G T C T A G A G T C C G T A A G T C C G A T A C G T C G T A A G T C A C G T C G A T A C G T A G T C
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCACTTACTTTC
ACCACTTAA----
 A C G T C T A G A G T C C G T A A G T C C G A T A C G T C G T A A G T C A C G T C G A T A C G T A G T C
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TGCACTTACTTTC
TACATGTGCACATAAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G T A A G T C C G A T A C G T C G T A A G T C A C G T C G A T A C G T A G T C
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGCACTTACTTTC
CCTTGCAATTTTTNN-
 A C G T A C G T A C G T A C G T C T A G A G T C C G T A A G T C C G A T A C G T C G T A A G T C A C G T C G A T A C G T A G T C
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGCACTTACTTTC
ACCACTTAA----
 A C G T C T A G A G T C C G T A A G T C C G A T A C G T C G T A A G T C A C G T C G A T A C G T A G T C
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGCACTTACTTTC
AAGCACTTAA----
 A C G T A C G T C T A G A G T C C G T A A G T C C G A T A C G T C G T A A G T C A C G T C G A T A C G T A G T C
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T