Information for 6-TGTGGTTTTC (Motif 6)

A C G T C T A G A C G T A C T G A T C G C G A T A C G T A C G T G C A T A T G C
Reverse Opposite:
T A C G C G T A T G C A C G T A C G T A T A G C G T A C C G T A A G T C G T C A
p-value:1e-13
log p-value:-3.054e+01
Information Content per bp:1.818
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.95%
Number of Background Sequences with motif367.5
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets46.1 +/- 27.1bp
Average Position of motif in Background49.3 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTTC
NNTGTGGTTT--
 A C G T A C G T A C G T C T A G A C G T A C T G A T C G C G A T A C G T A C G T G C A T A T G C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---TGTGGTTTTC
GTCTGTGGTTT--
 A C G T A C G T A C G T A C G T C T A G A C G T A C T G A T C G C G A T A C G T A C G T G C A T A T G C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTTC
CTGTGGTTTN-
 A C G T A C G T C T A G A C G T A C T G A T C G C G A T A C G T A C G T G C A T A T G C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGTTTTC
NNHTGTGGTTWN-
 A C G T A C G T A C G T A C G T C T A G A C G T A C T G A T C G C G A T A C G T A C G T G C A T A T G C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTTTTC
GCTGTGGTTT--
 A C G T A C G T A C G T C T A G A C G T A C T G A T C G C G A T A C G T A C G T G C A T A T G C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTTC
TTTGCGGTTT--
 A C G T A C G T A C G T C T A G A C G T A C T G A T C G C G A T A C G T A C G T G C A T A T G C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTTC
TTGCGGTTT--
 A C G T A C G T C T A G A C G T A C T G A T C G C G A T A C G T A C G T G C A T A T G C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGTGGTTTTC-
TGTGGATTNNN
 A C G T C T A G A C G T A C T G A T C G C G A T A C G T A C G T G C A T A T G C A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTTTTC
NNTGTGGATTSS
 A C G T A C G T A C G T C T A G A C G T A C T G A T C G C G A T A C G T A C G T G C A T A T G C
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGTGGTTTTC
-GTGGAT---
 A C G T C T A G A C G T A C T G A T C G C G A T A C G T A C G T G C A T A T G C
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T