Information for 3-TSAGAGKWMRTSCMAS (Motif 3)

A C G T A T C G C G T A A T C G C G T A A C T G A C G T C G T A G T C A C T A G A C G T A T C G A G T C G T A C C G T A A T G C
Reverse Opposite:
A T C G A C G T A C T G A C T G A T G C G T C A A G T C A C G T C G A T G T C A A G T C C G A T A T G C A C G T A T G C C G T A
p-value:1e-12
log p-value:-2.767e+01
Information Content per bp:1.802
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.67%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 20.1bp
Average Position of motif in Background32.0 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TSAGAGKWMRTSCMAS
--AGAGGAAGTG----
 A C G T A T C G C G T A A T C G C G T A A C T G A C G T C G T A G T C A C T A G A C G T A T C G A G T C G T A C C G T A A T G C
A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TSAGAGKWMRTSCMAS
CTTGAGTGGCT-------
 A C G T A C G T A C G T A T C G C G T A A T C G C G T A A C T G A C G T C G T A G T C A C T A G A C G T A T C G A G T C G T A C C G T A A T G C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TSAGAGKWMRTSCMAS
TTGAGTGSTT-------
 A C G T A C G T A T C G C G T A A T C G C G T A A C T G A C G T C G T A G T C A C T A G A C G T A T C G A G T C G T A C C G T A A T G C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TSAGAGKWMRTSCMAS
AGGGGTCAGAGGTCA------
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A T C G C G T A A C T G A C G T C G T A G T C A C T A G A C G T A T C G A G T C G T A C C G T A A T G C
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TSAGAGKWMRTSCMAS
-AACAGGAAGT-----
 A C G T A T C G C G T A A T C G C G T A A C T G A C G T C G T A G T C A C T A G A C G T A T C G A G T C G T A C C G T A A T G C
A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TSAGAGKWMRTSCMAS
GAGGTCAAAGGTCA------
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A A T C G C G T A A C T G A C G T C G T A G T C A C T A G A C G T A T C G A G T C G T A C C G T A A T G C
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TSAGAGKWMRTSCMAS
--ACAGGAAGTG----
 A C G T A T C G C G T A A T C G C G T A A C T G A C G T C G T A G T C A C T A G A C G T A T C G A G T C G T A C C G T A A T G C
A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TSAGAGKWMRTSCMAS---
--ATAGTTAATCCCCCNNA
 A C G T A T C G C G T A A T C G C G T A A C T G A C G T C G T A G T C A C T A G A C G T A T C G A G T C G T A C C G T A A T G C A C G T A C G T A C G T
A C G T A C G T C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----TSAGAGKWMRTSCMAS
GTATTGACAGGTNNTT----
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A A T C G C G T A A C T G A C G T C G T A G T C A C T A G A C G T A T C G A G T C G T A C C G T A A T G C
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TSAGAGKWMRTSCMAS
-NACAGGAAAT-----
 A C G T A T C G C G T A A T C G C G T A A C T G A C G T C G T A G T C A C T A G A C G T A T C G A G T C G T A C C G T A A T G C
A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T