Information for 1-ACTGTGGCACTDGAAT (Motif 1)

G C T A A T G C A C G T A C T G C G A T C T A G C T A G G A T C C G T A A T G C A C G T C A T G A T C G C G T A G T C A A C G T
Reverse Opposite:
G T C A A C G T A C G T T A G C G A T C G T C A A T C G C G A T C T A G A G T C A G T C C G T A A G T C C G T A T A C G C G A T
p-value:1e-12
log p-value:-2.767e+01
Information Content per bp:1.753
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.67%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.8 +/- 23.4bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.59
Offset:6
Orientation:forward strand
Alignment:ACTGTGGCACTDGAAT
------CCACTTGAA-
 G C T A A T G C A C G T A C T G C G A T C T A G C T A G G A T C C G T A A T G C A C G T C A T G A T C G C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACTGTGGCACTDGAAT-
TTTTAAGTACTTAAATT
 G C T A A T G C A C G T A C T G C G A T C T A G C T A G G A T C C G T A A T G C A C G T C A T G A T C G C G T A G T C A A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ACTGTGGCACTDGAAT--
--TAAGCCACTTGAATTT
 G C T A A T G C A C G T A C T G C G A T C T A G C T A G G A T C C G T A A T G C A C G T C A T G A T C G C G T A G T C A A C G T A C G T A C G T
A C G T A C G T G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACTGTGGCACTDGAAT--
--TAAGCCACTTGAAATT
 G C T A A T G C A C G T A C T G C G A T C T A G C T A G G A T C C G T A A T G C A C G T C A T G A T C G C G T A G T C A A C G T A C G T A C G T
A C G T A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ACTGTGGCACTDGAAT
-----RSCACTYRAG-
 G C T A A T G C A C G T A C T G C G A T C T A G C T A G G A T C C G T A A T G C A C G T C A T G A T C G C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ACTGTGGCACTDGAAT--
--TAAGCCACTTGAAATT
 G C T A A T G C A C G T A C T G C G A T C T A G C T A G G A T C C G T A A T G C A C G T C A T G A T C G C G T A G T C A A C G T A C G T A C G T
A C G T A C G T G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ACTGTGGCACTDGAAT
-----ACCACTTGAA-
 G C T A A T G C A C G T A C T G C G A T C T A G C T A G G A T C C G T A A T G C A C G T C A T G A T C G C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ACTGTGGCACTDGAAT---
--ATAACCACTTGAAAATT
 G C T A A T G C A C G T A C T G C G A T C T A G C T A G G A T C C G T A A T G C A C G T C A T G A T C G C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:ACTGTGGCACTDGAAT
-----NSCACTYVAV-
 G C T A A T G C A C G T A C T G C G A T C T A G C T A G G A T C C G T A A T G C A C G T C A T G A T C G C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

SOX4/MA0867.1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:ACTGTGGCACTDGAAT-----
-----AACACTGCAATTGTTC
 G C T A A T G C A C G T A C T G C G A T C T A G C T A G G A T C C G T A A T G C A C G T C A T G A T C G C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C