Information for 2-TGCGCCCTGCCCT (Motif 2)

A C G T A C T G A G T C A T C G A T G C A G T C A G T C A C G T C T A G A G T C A G T C A G T C C A G T
Reverse Opposite:
G C T A A C T G A C T G A C T G A G T C C G T A A C T G C T A G A T C G A T G C A C T G A G T C C G T A
p-value:1e-11
log p-value:-2.609e+01
Information Content per bp:1.897
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.9 +/- 23.6bp
Average Position of motif in Background42.1 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGCGCCCTGCCCT-
TGACCTTTGCCCTA
 A C G T A C T G A G T C A T C G A T G C A G T C A G T C A C G T C T A G A G T C A G T C A G T C C A G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.63
Offset:6
Orientation:forward strand
Alignment:TGCGCCCTGCCCT--
------CTGCCCGCA
 A C G T A C T G A G T C A T C G A T G C A G T C A G T C A C G T C T A G A G T C A G T C A G T C C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCGCCCTGCCCT--
TGACCTTTGCCCTAN
 A C G T A C T G A G T C A T C G A T G C A G T C A G T C A C G T C T A G A G T C A G T C A G T C C A G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGCGCCCTGCCCT
---GCCCCGCCCC
 A C G T A C T G A G T C A T C G A T G C A G T C A G T C A C G T C T A G A G T C A G T C A G T C C A G T
A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGCGCCCTGCCCT-
--GGCCCCGCCCCC
 A C G T A C T G A G T C A T C G A T G C A G T C A G T C A C G T C T A G A G T C A G T C A G T C C A G T A C G T
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

Klf4/MA0039.2/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGCGCCCTGCCCT
---GCCCCACCCA
 A C G T A C T G A G T C A T C G A T G C A G T C A G T C A C G T C T A G A G T C A G T C A G T C C A G T
A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGCGCCCTGCCCT
---GCCMCRCCCH
 A C G T A C T G A G T C A T C G A T G C A G T C A G T C A C G T C T A G A G T C A G T C A G T C C A G T
A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCGCCCTGCCCT--
TGACCTCTGACCCCN
 A C G T A C T G A G T C A T C G A T G C A G T C A G T C A C G T C T A G A G T C A G T C A G T C C A G T A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGCGCCCTGCCCT---
-NRGCCCCRCCCHBNN
 A C G T A C T G A G T C A T C G A T G C A G T C A G T C A C G T C T A G A G T C A G T C A G T C C A G T A C G T A C G T A C G T
A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGCGCCCTGCCCT-
--KGCCCTTCCCCA
 A C G T A C T G A G T C A T C G A T G C A G T C A G T C A C G T C T A G A G T C A G T C A G T C C A G T A C G T
A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A