Information for 3-YAGTGRACTCTAK (Motif 8)

G A C T C G T A A C T G A C G T A C T G C T A G C G T A A G T C A C G T A G T C A C G T C G T A A C T G
Reverse Opposite:
G T A C C G A T C G T A A C T G C G T A C T A G A C G T A G T C A G T C C G T A A G T C A C G T C T A G
p-value:1e-13
log p-value:-3.036e+01
Information Content per bp:1.888
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.5 +/- 25.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-YAGTGRACTCTAK--
NNATTGGACTTTNGNN
 A C G T G A C T C G T A A C T G A C G T A C T G C T A G C G T A A G T C A C G T A G T C A C G T C G T A A C T G A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-YAGTGRACTCTAK
NNTGTGGATTSS--
 A C G T G A C T C G T A A C T G A C G T A C T G C T A G C G T A A G T C A C G T A G T C A C G T C G T A A C T G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:YAGTGRACTCTAK
-TGTGGATTNNN-
 G A C T C G T A A C T G A C G T A C T G C T A G C G T A A G T C A C G T A G T C A C G T C G T A A C T G
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:YAGTGRACTCTAK
--GTGGAT-----
 G A C T C G T A A C T G A C G T A C T G C T A G C G T A A G T C A C G T A G T C A C G T C G T A A C T G
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:YAGTGRACTCTAK--
---AGGTCTCTAACC
 G A C T C G T A A C T G A C G T A C T G C T A G C G T A A G T C A C G T A G T C A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:YAGTGRACTCTAK------
---TGGACTTTGNNCTNTG
 G A C T C G T A A C T G A C G T A C T G C T A G C G T A A G T C A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:YAGTGRACTCTAK
--GTGACCTT---
 G A C T C G T A A C T G A C G T A C T G C T A G C G T A A G T C A C G T A G T C A C G T C G T A A C T G
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:YAGTGRACTCTAK-----
---TGGACTTTGNNCTCN
 G A C T C G T A A C T G A C G T A C T G C T A G C G T A A G T C A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:YAGTGRACTCTAK
--CTGACCTTTG-
 G A C T C G T A A C T G A C G T A C T G C T A G C G T A A G T C A C G T A G T C A C G T C G T A A C T G
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:YAGTGRACTCTAK
---TGACCYCT--
 G A C T C G T A A C T G A C G T A C T G C T A G C G T A A G T C A C G T A G T C A C G T C G T A A C T G
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T