Information for 6-CCACCAGGTGGCG (Motif 13)

A G T C A G T C C G T A T A G C A G T C C G T A C A T G T A C G C G A T A T C G A T C G A G T C C A T G
Reverse Opposite:
G A T C A C T G A T G C A T G C G C T A A T G C G A T C C G A T A C T G A C T G C G A T C T A G C T A G
p-value:1e-10
log p-value:-2.478e+01
Information Content per bp:1.753
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.32%
Number of Background Sequences with motif162.5
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets50.0 +/- 23.6bp
Average Position of motif in Background50.4 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-CCACCAGGTGGCG------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A G T C C G T A T A G C A G T C C G T A C A T G T A C G C G A T A T C G A T C G A G T C C A T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.86
Offset:-3
Orientation:forward strand
Alignment:---CCACCAGGTGGCG---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A G T C C G T A T A G C A G T C C G T A C A T G T A C G C G A T A T C G A T C G A G T C C A T G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---CCACCAGGTGGCG----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A G T C C G T A T A G C A G T C C G T A C A T G T A C G C G A T A T C G A T C G A G T C C A T G A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CCACCAGGTGGCG
--AACAGGTGNT-
 A G T C A G T C C G T A T A G C A G T C C G T A C A T G T A C G C G A T A T C G A T C G A G T C C A T G
A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CCACCAGGTGGCG
--NNCAGGTGNN-
 A G T C A G T C C G T A T A G C A G T C C G T A C A T G T A C G C G A T A T C G A T C G A G T C C A T G
A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCACCAGGTGGCG
--AACAGATGGC-
 A G T C A G T C C G T A T A G C A G T C C G T A C A T G T A C G C G A T A T C G A T C G A G T C C A T G
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:7
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CCACCAGGTGGCG
---VCAGCTGBNN
 A G T C A G T C C G T A T A G C A G T C C G T A C A T G T A C G C G A T A T C G A T C G A G T C C A T G
A C G T A C G T A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCACCAGGTGGCG
-SDGCAGGTGCNS
 A G T C A G T C C G T A T A G C A G T C C G T A C A T G T A C G C G A T A T C G A T C G A G T C C A T G
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCACCAGGTGGCG
VNAVCAGCTGGC-
 A G T C A G T C C G T A T A G C A G T C C G T A C A T G T A C G C G A T A T C G A T C G A G T C C A T G
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCACCAGGTGGCG
--NNCAGGTGTN-
 A G T C A G T C C G T A T A G C A G T C C G T A C A T G T A C G C G A T A T C G A T C G A G T C C A T G
A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T