Information for 8-AGCAGTTTTGAAG (Motif 8)

C G T A A C T G A G T C C G T A T A C G A C G T A C G T A C G T A C G T A T C G C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A T G C C G T A C G T A C G T A C G T A A G T C C G A T A C T G A G T C A C G T
p-value:1e-10
log p-value:-2.456e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.6 +/- 26.8bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:AGCAGTTTTGAAG---
------TTTGAAACCG
 C G T A A C T G A G T C C G T A T A C G A C G T A C G T A C G T A C G T A T C G C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AGCAGTTTTGAAG-
-----ATTTGAATT
 C G T A A C T G A G T C C G T A T A C G A C G T A C G T A C G T A C G T A T C G C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PB0042.1_Mafk_1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAGTTTTGAAG
AAGTCAGCANTTTTN---
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A T A C G A C G T A C G T A C G T A C G T A T C G C G T A C G T A A C T G
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AGCAGTTTTGAAG
HWWGTCAGCAWWTTT----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A T A C G A C G T A C G T A C G T A C G T A T C G C G T A C G T A A C T G
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGCAGTTTTGAAG
CCTTGCAATTTTTNN-
 A C G T A C G T A C G T C G T A A C T G A G T C C G T A T A C G A C G T A C G T A C G T A C G T A T C G C G T A C G T A A C T G
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGCAGTTTTGAAG-
----CCTTTGATGT
 C G T A A C T G A G T C C G T A T A C G A C G T A C G T A C G T A C G T A T C G C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGCAGTTTTGAAG-
----CCTTTGAWGT
 C G T A A C T G A G T C C G T A T A C G A C G T A C G T A C G T A C G T A T C G C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGTTTTGAAG
BRRCVGTTDN----
 A C G T C G T A A C T G A G T C C G T A T A C G A C G T A C G T A C G T A C G T A T C G C G T A C G T A A C T G
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGCAGTTTTGAAG
NGTCAGCANTTT-----
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A T A C G A C G T A C G T A C G T A C G T A T C G C G T A C G T A A C T G
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGCAGTTTTGAAG-------
---NANTTTCAAGTGGTTAN
 C G T A A C T G A G T C C G T A T A C G A C G T A C G T A C G T A C G T A T C G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T