Information for 7-CTGCGTGCGGCTC (Motif 11)

A G T C A C G T A C T G A G T C A C T G A G C T A C T G A G T C A C T G A C T G T A G C A C G T A G T C
Reverse Opposite:
A C T G C G T A A T C G A G T C A G T C A C T G A G T C C T G A G T A C A C T G A G T C C G T A A C T G
p-value:1e-9
log p-value:-2.241e+01
Information Content per bp:1.936
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.8 +/- 27.3bp
Average Position of motif in Background61.9 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTGCGTGCGGCTC
TTGCGTGCVA---
 A G T C A C G T A C T G A G T C A C T G A G C T A C T G A G T C A C T G A C T G T A G C A C G T A G T C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGCGTGCGGCTC
-TGCGTG------
 A G T C A C G T A C T G A G T C A C T G A G C T A C T G A G T C A C T G A C T G T A G C A C G T A G T C
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGCGTGCGGCTC
-NGCCTGAGGCN-
 A G T C A C G T A C T G A G T C A C T G A G C T A C T G A G T C A C T G A C T G T A G C A C G T A G T C
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGCGTGCGGCTC
-TGCCTGAGGCN-
 A G T C A C G T A C T G A G T C A C T G A G C T A C T G A G T C A C T G A C T G T A G C A C G T A G T C
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGCGTGCGGCTC
-TGGGTGTGGC--
 A G T C A C G T A C T G A G T C A C T G A G C T A C T G A G T C A C T G A C T G T A G C A C G T A G T C
A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGCGTGCGGCTC
-NGCCTNAGGCN-
 A G T C A C G T A C T G A G T C A C T G A G C T A C T G A G T C A C T G A C T G T A G C A C G T A G T C
A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGCGTGCGGCTC-
ANTGCCTGAGGCAAN
 A C G T A G T C A C G T A C T G A G T C A C T G A G C T A C T G A G T C A C T G A C T G T A G C A C G T A G T C A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGCGTGCGGCTC
NTGGGTGTGGCC-
 A G T C A C G T A C T G A G T C A C T G A G C T A C T G A G T C A C T G A C T G T A G C A C G T A G T C
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGCGTGCGGCTC
MKGGGYGTGGCC-
 A G T C A C G T A C T G A G T C A C T G A G C T A C T G A G T C A C T G A C T G T A G C A C G T A G T C
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGCGTGCGGCTC
-TGGGTGTGGCN-
 A G T C A C G T A C T G A G T C A C T G A G C T A C T G A G T C A C T G A C T G T A G C A C G T A G T C
A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C A C G T