Information for 1-TRGAAVKTTCYAGAAN (Motif 1)

G A C T C T A G A C T G T C G A C T G A T G A C C A T G A G C T C A G T A G T C A G C T C T G A A T C G G T C A C T G A C T A G
Reverse Opposite:
G A C T G A C T A C G T T A G C G A C T C T G A C T A G G C T A C T G A G T A C A C T G G A C T A G C T G T A C A G T C C T G A
p-value:1e-47
log p-value:-1.097e+02
Information Content per bp:1.619
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif7.33%
Number of Background Sequences with motif191.8
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets46.1 +/- 25.7bp
Average Position of motif in Background46.8 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TRGAAVKTTCYAGAAN
TAGAANVTTCTAGAA-
 G A C T C T A G A C T G T C G A C T G A T G A C C A T G A G C T C A G T A G T C A G C T C T G A A T C G G T C A C T G A C T A G
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.92
Offset:-3
Orientation:reverse strand
Alignment:---TRGAAVKTTCYAGAAN-
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T G A C T C T A G A C T G T C G A C T G A T G A C C A T G A G C T C A G T A G T C A G C T C T G A A T C G G T C A C T G A C T A G A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

HSF4/MA0771.1/Jaspar

Match Rank:3
Score:0.91
Offset:2
Orientation:reverse strand
Alignment:TRGAAVKTTCYAGAAN
--GAANNTTCTAGAA-
 G A C T C T A G A C T G T C G A C T G A T G A C C A T G A G C T C A G T A G T C A G C T C T G A A T C G G T C A C T G A C T A G
A C G T A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A A C G T

HSF2/MA0770.1/Jaspar

Match Rank:4
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:TRGAAVKTTCYAGAAN
--GAANGTTCTAGAA-
 G A C T C T A G A C T G T C G A C T G A T G A C C A T G A G C T C A G T A G T C A G C T C T G A A T C G G T C A C T G A C T A G
A C G T A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A A C G T

HSF1/MA0486.2/Jaspar

Match Rank:5
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:TRGAAVKTTCYAGAAN
--GAACGTTCTAGAA-
 G A C T C T A G A C T G T C G A C T G A T G A C C A T G A G C T C A G T A G T C A G C T C T G A A T C G G T C A C T G A C T A G
A C G T A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TRGAAVKTTCYAGAAN--
-CTAAGGTTCTAGATCAC
 G A C T C T A G A C T G T C G A C T G A T G A C C A T G A G C T C A G T A G T C A G C T C T G A A T C G G T C A C T G A C T A G A C G T A C G T
A C G T A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TRGAAVKTTCYAGAAN-
--BCNGGTTCTAGANCN
 G A C T C T A G A C T G T C G A C T G A T G A C C A T G A G C T C A G T A G T C A G C T C T G A A T C G G T C A C T G A C T A G A C G T
A C G T A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TRGAAVKTTCYAGAAN
-GGGAATTTCC-----
 G A C T C T A G A C T G T C G A C T G A T G A C C A T G A G C T C A G T A G T C A G C T C T G A A T C G G T C A C T G A C T A G
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TRGAAVKTTCYAGAAN
-GGGAATTTCC-----
 G A C T C T A G A C T G T C G A C T G A T G A C C A T G A G C T C A G T A G T C A G C T C T G A A T C G G T C A C T G A C T A G
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TRGAAVKTTCYAGAAN
----ATTTTCCATT--
 G A C T C T A G A C T G T C G A C T G A T G A C C A T G A G C T C A G T A G T C A G C T C T G A A T C G G T C A C T G A C T A G
A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T