Information for 12-AACACTTTACATC (Motif 20)

C G T A C G T A A G T C C G T A A G T C C G A T A C G T G A C T C G T A A G T C C G T A A C G T G T A C
Reverse Opposite:
A C T G C G T A A C G T A C T G A C G T C G T A G T C A C G T A A C T G C G A T A C T G A C G T A C G T
p-value:1e-9
log p-value:-2.229e+01
Information Content per bp:1.877
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.0 +/- 31.2bp
Average Position of motif in Background27.5 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX8/MA0868.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AACACTTTACATC---
AACACTGCACATTGTT
 C G T A C G T A A G T C C G T A A G T C C G A T A C G T G A C T C G T A A G T C C G T A A C G T G T A C A C G T A C G T A C G T
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AACACTTTACATC-----
-TCNCTTTACAGCGNNNT
 C G T A C G T A A G T C C G T A A G T C C G A T A C G T G A C T C G T A A G T C C G T A A C G T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AACACTTTACATC-----
-TCNNTTTACAGCGNNNT
 C G T A C G T A A G T C C G T A A G T C C G A T A C G T G A C T C G T A A G T C C G T A A C G T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AACACTTTACATC-----
-TCNNTTTACAGCGNNNT
 C G T A C G T A A G T C C G T A A G T C C G A T A C G T G A C T C G T A A G T C C G T A A C G T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AACACTTTACATC
TAAGCCACTTGAAATT
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A G T C C G A T A C G T G A C T C G T A A G T C C G T A A C G T G T A C
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AACACTTTACATC
ACCACTTGAA---
 C G T A C G T A A G T C C G T A A G T C C G A T A C G T G A C T C G T A A G T C C G T A A C G T G T A C
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AACACTTTACATC
RSCACTYRAG---
 C G T A C G T A A G T C C G T A A G T C C G A T A C G T G A C T C G T A A G T C C G T A A C G T G T A C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AACACTTTACATC
ACCACTTAA----
 C G T A C G T A A G T C C G T A A G T C C G A T A C G T G A C T C G T A A G T C C G T A A C G T G T A C
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AACACTTTACATC
MRSCACTYAA----
 A C G T C G T A C G T A A G T C C G T A A G T C C G A T A C G T G A C T C G T A A G T C C G T A A C G T G T A C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AACACTTTACATC-
ATAACCACTTGAAAATT
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A G T C C G A T A C G T G A C T C G T A A G T C C G T A A C G T G T A C A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T