Information for 12-CCCCTGGCGG (Motif 19)

A G T C A G T C A G T C A G T C C G A T T A C G A C T G A T G C A C T G A C T G
Reverse Opposite:
A G T C G T A C T A C G A G T C A G T C C G T A C T A G C T A G A C T G A C T G
p-value:1e-9
log p-value:-2.299e+01
Information Content per bp:1.861
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif55.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets56.4 +/- 30.0bp
Average Position of motif in Background42.1 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.73
Offset:-9
Orientation:forward strand
Alignment:---------CCCCTGGCGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G A T T A C G A C T G A T G C A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGGCGG--
CCCCCCCGGGGGGGT
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G A T T A C G A C T G A T G C A C T G A C T G A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGGCGG-
CACCCCCGGGGGGG
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G A T T A C G A C T G A T G C A C T G A C T G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGGCGG--
CCCCCCCGGGGGGGT
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G A T T A C G A C T G A T G C A C T G A C T G A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGGCGG-
TCCCCTGGGGAC
 A C G T A G T C A G T C A G T C A G T C C G A T T A C G A C T G A T G C A C T G A C T G A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------CCCCTGGCGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G A T T A C G A C T G A T G C A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------CCCCTGGCGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G A T T A C G A C T G A T G C A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTGGCGG
CGCCCCCTGACA-
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G A T T A C G A C T G A T G C A C T G A C T G
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGGCGG--
TGCCCNNAGGGCA
 A C G T A G T C A G T C A G T C A G T C C G A T T A C G A C T G A T G C A C T G A C T G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCCCTGGCGG--
TGCCCTGAGGGCA
 A C G T A G T C A G T C A G T C A G T C C G A T T A C G A C T G A T G C A C T G A C T G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A