Information for 11-TGGCTRTGWGTAC (Motif 18)

A C G T A C T G A C T G G A T C G A C T T C G A C G A T A C T G C G T A A C T G G A C T C G T A A T G C
Reverse Opposite:
A T C G C G A T C T G A G T A C G C A T A G T C C G T A A G C T C T G A C T A G A G T C A G T C C G T A
p-value:1e-10
log p-value:-2.345e+01
Information Content per bp:1.759
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.8 +/- 27.9bp
Average Position of motif in Background51.3 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGCTRTGWGTAC
TTGGCA--------
 A C G T A C G T A C T G A C T G G A T C G A C T T C G A C G A T A C T G C G T A A C T G G A C T C G T A A T G C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGGCTRTGWGTAC
NTTGGCANN------
 A C G T A C G T A C G T A C T G A C T G G A T C G A C T T C G A C G A T A C T G C G T A A C T G G A C T C G T A A T G C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGGCTRTGWGTAC
TGATTGGCTANN-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G G A T C G A C T T C G A C G A T A C T G C G T A A C T G G A C T C G T A A T G C
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T A C G T A C G T A C G T

RFX4/MA0799.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGGCTRTGWGTAC-
CGTTGCCATGGCAACG
 A C G T A C G T A C G T A C T G A C T G G A T C G A C T T C G A C G A T A C T G C G T A A C T G G A C T C G T A A T G C A C G T
A T G C C T A G G C A T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGGCTRTGWGTAC
TGACCTTGAN---
 A C G T A C T G A C T G G A T C G A C T T C G A C G A T A C T G C G T A A C T G G A C T C G T A A T G C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGGCTRTGWGTAC
GTTGCCATGGNAAC
 A C G T A C G T A C T G A C T G G A T C G A C T T C G A C G A T A C T G C G T A A C T G G A C T C G T A A T G C
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGGCTRTGWGTAC
GCTGACCTTGAACTN
 A C G T A C G T A C G T A C T G A C T G G A T C G A C T T C G A C G A T A C T G C G T A A C T G G A C T C G T A A T G C
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGGCTRTGWGTAC
TGACCTTGAV---
 A C G T A C T G A C T G G A T C G A C T T C G A C G A T A C T G C G T A A C T G G A C T C G T A A T G C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGGCTRTGWGTAC
BNTGDCCTTG-----
 A C G T A C G T A C G T A C T G A C T G G A T C G A C T T C G A C G A T A C T G C G T A A C T G G A C T C G T A A T G C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TGGCTRTGWGTAC-
------TGTTTACH
 A C G T A C T G A C T G G A T C G A C T T C G A C G A T A C T G C G T A A C T G G A C T C G T A A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A