Information for 1-AAATCWCAGC (Motif 1)

T G C A C G T A C G T A A G C T A G T C G C T A A T G C C G T A C T A G G T A C
Reverse Opposite:
C A T G G A T C G C A T T A C G C G A T A C T G C T G A C G A T A C G T A C G T
p-value:1e-132
log p-value:-3.049e+02
Information Content per bp:1.708
Number of Target Sequences with motif347.0
Percentage of Target Sequences with motif48.80%
Number of Background Sequences with motif5394.4
Percentage of Background Sequences with motif11.53%
Average Position of motif in Targets51.4 +/- 23.5bp
Average Position of motif in Background49.7 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:AAATCWCAGC-
AAATCACAGCA
 T G C A C G T A C G T A A G C T A G T C G C T A A T G C C G T A C T A G G T A C A C G T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:forward strand
Alignment:AAATCWCAGC
AAATCACTGC
 T G C A C G T A C G T A A G C T A G T C G C T A A T G C C G T A C T A G G T A C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-AAATCWCAGC
CAAATCACTG-
 A C G T T G C A C G T A C G T A A G C T A G T C G C T A A T G C C G T A C T A G G T A C
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.78
Offset:-6
Orientation:forward strand
Alignment:------AAATCWCAGC-
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C G T A A G C T A G T C G C T A A T G C C G T A C T A G G T A C A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AAATCWCAGC
CCAATCAA---
 A C G T T G C A C G T A C G T A A G C T A G T C G C T A A T G C C G T A C T A G G T A C
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:6
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------AAATCWCAGC
GGCCATAAATCAC---
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C G T A A G C T A G T C G C T A A T G C C G T A C T A G G T A C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:7
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AAATCWCAGC
GCCATAAATCA----
 A C G T A C G T A C G T A C G T A C G T T G C A C G T A C G T A A G C T A G T C G C T A A T G C C G T A C T A G G T A C
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:8
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------AAATCWCAGC
GGCCATAAATCA----
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C G T A A G C T A G T C G C T A A T G C C G T A C T A G G T A C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:9
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------AAATCWCAGC
GGCCATAAATCA----
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C G T A A G C T A G T C G C T A A T G C C G T A C T A G G T A C
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAATCWCAGC
AAACCACANN
 T G C A C G T A C G T A A G C T A G T C G C T A A T G C C G T A C T A G G T A C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A