Information for 3-GGGCAGCTTG (Motif 3)

A C T G A C T G A T C G T G A C G T C A C T A G A G T C C A G T A C G T A C T G
Reverse Opposite:
G T A C C G T A G T C A C T A G A G T C C A G T A C T G A T G C G T A C G T A C
p-value:1e-13
log p-value:-3.208e+01
Information Content per bp:1.834
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.96%
Number of Background Sequences with motif184.3
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets54.4 +/- 25.3bp
Average Position of motif in Background52.8 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAGCTTG
TNNGGGCAG----
 A C G T A C G T A C G T A C T G A C T G A T C G T G A C G T C A C T A G A G T C C A G T A C G T A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGGCAGCTTG
---AAGCTTG
 A C T G A C T G A T C G T G A C G T C A C T A G A G T C C A G T A C G T A C T G
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGCAGCTTG----
AGGTCACCCTGACCT
 A C G T A C T G A C T G A T C G T G A C G T C A C T A G A G T C C A G T A C G T A C T G A C G T A C G T A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAGCTTG
NGTGGGCAT----
 A C G T A C G T A C G T A C T G A C T G A T C G T G A C G T C A C T A G A G T C C A G T A C G T A C T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGGCAGCTTG---
NAGGTCACNNTGACC
 A C G T A C G T A C T G A C T G A T C G T G A C G T C A C T A G A G T C C A G T A C G T A C T G A C G T A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GGGCAGCTTG
WDNCTGGGCA-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T C G T G A C G T C A C T A G A G T C C A G T A C G T A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGGCAGCTTG--
-GACAGCTGCAG
 A C T G A C T G A T C G T G A C G T C A C T A G A G T C C A G T A C G T A C T G A C G T A C G T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGGCAGCTTG
---CAGCC--
 A C T G A C T G A T C G T G A C G T C A C T A G A G T C C A G T A C G T A C T G
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGGCAGCTTG---
GAGCACAGCAGGACA
 A C G T A C G T A C T G A C T G A T C G T G A C G T C A C T A G A G T C C A G T A C G T A C T G A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGGCAGCTTG
----TGCGTG
 A C T G A C T G A T C G T G A C G T C A C T A G A G T C C A G T A C G T A C T G
A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G