Information for 6-AGGGSCYTTC (Motif 13)

C G T A A C T G A T C G A C T G T A G C A T G C A G T C G A C T G C A T T A G C
Reverse Opposite:
A T C G C G T A C T G A T C A G A T C G A T C G A G T C A T G C A G T C G C A T
p-value:1e-9
log p-value:-2.104e+01
Information Content per bp:1.840
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif240.4
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets42.0 +/- 28.2bp
Average Position of motif in Background51.5 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AGGGSCYTTC
NRRGGGTCTT--
 A C G T A C G T C G T A A C T G A T C G A C T G T A G C A T G C A G T C G A C T G C A T T A G C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGGGSCYTTC-
-GGGGATTTCC
 C G T A A C T G A T C G A C T G T A G C A T G C A G T C G A C T G C A T T A G C A C G T
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGGGSCYTTC-
-GGGGATTTCC
 C G T A A C T G A T C G A C T G T A G C A T G C A G T C G A C T G C A T T A G C A C G T
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGGGSCYTTC--
NGGGGATTTCCC
 C G T A A C T G A T C G A C T G T A G C A T G C A G T C G A C T G C A T T A G C A C G T A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGGGSCYTTC-
-GGGAATTTCC
 C G T A A C T G A T C G A C T G T A G C A T G C A G T C G A C T G C A T T A G C A C G T
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGGGSCYTTC
TGGGGCCCAC
 C G T A A C T G A T C G A C T G T A G C A T G C A G T C G A C T G C A T T A G C
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGGSCYTTC-
-GGGAATTTCC
 C G T A A C T G A T C G A C T G T A G C A T G C A G T C G A C T G C A T T A G C A C G T
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGGGSCYTTC---
NNGCACCTTTCTCC
 A C G T C G T A A C T G A T C G A C T G T A G C A T G C A G T C G A C T G C A T T A G C A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGGGSCYTTC
TTGAGTGSTT---
 A C G T A C G T A C G T C G T A A C T G A T C G A C T G T A G C A T G C A G T C G A C T G C A T T A G C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGGGSCYTTC
GGTTAGAGACCT--
 A C G T A C G T A C G T A C G T C G T A A C T G A T C G A C T G T A G C A T G C A G T C G A C T G C A T T A G C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T