Information for 12-CCAGTCCCAGGAG (Motif 9)

A G T C A G T C C G T A A C T G C G A T A G T C A G T C A G T C C G T A A C T G A T C G C G T A A C T G
Reverse Opposite:
A G T C A C G T A T G C A G T C A C G T A C T G C T A G A C T G G C T A A G T C C G A T A C T G C T A G
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.897
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.3 +/- 23.4bp
Average Position of motif in Background57.8 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCAGTCCCAGGAG---
-ATTTCCCAGVAKSCY
 A G T C A G T C C G T A A C T G C G A T A G T C A G T C A G T C C G T A A C T G A T C G C G T A A C T G A C G T A C G T A C G T
A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCAGTCCCAGGAG-
--NGTCCCNNGGGA
 A G T C A G T C C G T A A C T G C G A T A G T C A G T C A G T C C G T A A C T G A T C G C G T A A C T G A C G T
A C G T A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCAGTCCCAGGAG----
-----CACAGCAGGGGG
 A G T C A G T C C G T A A C T G C G A T A G T C A G T C A G T C C G T A A C T G A T C G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCAGTCCCAGGAG-------
YCAGGCWCAGTACCAGGCTC
 A G T C A G T C C G T A A C T G C G A T A G T C A G T C A G T C C G T A A C T G A T C G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

EBF1/MA0154.3/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCAGTCCCAGGAG---
--ANTCCCTNGGGAAT
 A G T C A G T C C G T A A C T G C G A T A G T C A G T C A G T C C G T A A C T G A T C G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCAGTCCCAGGAG
GCCACACCCA----
 A C G T A G T C A G T C C G T A A C T G C G A T A G T C A G T C A G T C C G T A A C T G A T C G C G T A A C T G
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCAGTCCCAGGAG--
-CAGGCCNNGGCCNN
 A G T C A G T C C G T A A C T G C G A T A G T C A G T C A G T C C G T A A C T G A T C G C G T A A C T G A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CCAGTCCCAGGAG------
----DCHCAGCAGGRGGCC
 A G T C A G T C C G T A A C T G C G A T A G T C A G T C A G T C C G T A A C T G A T C G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCAGTCCCAGGAG----
--CCACACAGCAGGAGA
 A G T C A G T C C G T A A C T G C G A T A G T C A G T C A G T C C G T A A C T G A T C G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCAGTCCCAGGAG-
--GTCCCCAGGGGA
 A G T C A G T C C G T A A C T G C G A T A G T C A G T C A G T C C G T A A C T G A T C G C G T A A C T G A C G T
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A