Information for 6-AGAGAGCTTC (Motif 7)

C G T A C A T G C G T A T A C G C T G A A C T G G A T C A G C T A C G T A G T C
Reverse Opposite:
C T A G T G C A C T G A C T A G G T A C A G C T A T G C C G A T G T A C A C G T
p-value:1e-10
log p-value:-2.345e+01
Information Content per bp:1.830
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif107.4
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets50.5 +/- 25.1bp
Average Position of motif in Background52.8 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:forward strand
Alignment:AGAGAGCTTC-
-----GCTTCC
 C G T A C A T G C G T A T A C G C T G A A C T G G A T C A G C T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGAGAGCTTC
GGTTAGAGACCT--
 A C G T A C G T A C G T A C G T C G T A C A T G C G T A T A C G C T G A A C T G G A T C A G C T A C G T A G T C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGAGAGCTTC
--CAAGCTT-
 C G T A C A T G C G T A T A C G C T G A A C T G G A T C A G C T A C G T A G T C
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGCTTC
TTGAGTGSTT-
 A C G T C G T A C A T G C G T A T A C G C T G A A C T G G A T C A G C T A C G T A G T C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAGCTTC
CTTGAGTGGCT-
 A C G T A C G T C G T A C A T G C G T A T A C G C T G A A C T G G A T C A G C T A C G T A G T C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGAGAGCTTC
---CAGCC--
 C G T A C A T G C G T A T A C G C T G A A C T G G A T C A G C T A C G T A G T C
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGAGAGCTTC
TTGACCGAGAATTCC
 A C G T A C G T A C G T A C G T A C G T C G T A C A T G C G T A T A C G C T G A A C T G G A T C A G C T A C G T A G T C
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----AGAGAGCTTC--
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A C G T C G T A C A T G C G T A T A C G C T G A A C T G G A T C A G C T A C G T A G T C A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGAGAGCTTC--
-AACAGCTGCAG
 C G T A C A T G C G T A T A C G C T G A A C T G G A T C A G C T A C G T A G T C A C G T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGAGAGCTTC--
-GACAGCTGCAG
 C G T A C A T G C G T A T A C G C T G A A C T G G A T C A G C T A C G T A G T C A C G T A C G T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G