Information for 8-MCAAGGMTTC (Motif 14)

G T A C A G T C C G T A C G T A A C T G A C T G G T C A A C G T A C G T T A G C
Reverse Opposite:
A T C G C G T A C G T A A C G T A G T C A G T C A C G T C G A T A C T G A C T G
p-value:1e-7
log p-value:-1.665e+01
Information Content per bp:1.832
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif63.3
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets53.5 +/- 23.6bp
Average Position of motif in Background43.6 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:MCAAGGMTTC--
--VRGGATTARN
 G T A C A G T C C G T A C G T A A C T G A C T G G T C A A C G T A C G T T A G C A C G T A C G T
A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:MCAAGGMTTC
--NGGGATTA
 G T A C A G T C C G T A C G T A A C T G A C T G G T C A A C G T A C G T T A G C
A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:MCAAGGMTTC-
---NGGATTAA
 G T A C A G T C C G T A C G T A A C T G A C T G G T C A A C G T A C G T T A G C A C G T
A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:MCAAGGMTTC--
---GGGATTANN
 G T A C A G T C C G T A C G T A A C T G A C T G G T C A A C G T A C G T T A G C A C G T A C G T
A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--MCAAGGMTTC----
CTACTAGGATGTNNTN
 A C G T A C G T G T A C A G T C C G T A C G T A A C T G A C T G G T C A A C G T A C G T T A G C A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:MCAAGGMTTC--
----GGATTAGC
 G T A C A G T C C G T A C G T A A C T G A C T G G T C A A C G T A C G T T A G C A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:MCAAGGMTTC-
---GGGATTAA
 G T A C A G T C C G T A C G T A A C T G A C T G G T C A A C G T A C G T T A G C A C G T
A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:MCAAGGMTTC
-CNAGGCCT-
 G T A C A G T C C G T A C G T A A C T G A C T G G T C A A C G T A C G T T A G C
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:MCAAGGMTTC-
---RGGATTAR
 G T A C A G T C C G T A C G T A A C T G A C T G G T C A A C G T A C G T T A G C A C G T
A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:MCAAGGMTTC-
---NGGATTAN
 G T A C A G T C C G T A C G T A A C T G A C T G G T C A A C G T A C G T T A G C A C G T
A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T