Information for 14-AGGGGATTCATGA (Motif 11)

C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T A C T G C G T A C G T A A C G T A G T C A G T C A G T C A G T C A C G T
p-value:1e-8
log p-value:-1.905e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 26.6bp
Average Position of motif in Background43.8 +/- 11.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AGGGGATTCATGA----
---ACATTCATGACACG
 C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PH0138.1_Pitx2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGGGGATTCATGA--
TGAAGGGATTAATCATC
 A C G T A C G T C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0129.1_Otx1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGGGGATTCATGA--
AGAGGGGATTAATTTAT
 A C G T A C G T C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0121.1_Obox1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATTCATGA-
TTAAGGGGATTAACTAC
 A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0130.1_Otx2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGGGGATTCATGA--
TGTAGGGATTAATTGTC
 A C G T A C G T C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0035.1_Gsc/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGGGGATTCATGA--
NNAAGGGATTAACGANT
 A C G T A C G T C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

PH0137.1_Pitx1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATTCATGA-
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0122.1_Obox2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATTCATGA-
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGGGGATTCATGA
---TGATTGATGA
 C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T A C T G C G T A
A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

PH0123.1_Obox3/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATTCATGA-
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G C G T A A C G T A C G T A G T C C G T A A C G T A C T G C G T A A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T