Information for 8-AGCAATGGGCAGC (Motif 3)

G T C A A C T G G T A C C G T A C T G A C G A T C T A G A C T G C T A G G T A C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A G T C A G T C A G T C G C T A G A C T C G A T A C T G A G T C A C G T
p-value:1e-18
log p-value:-4.239e+01
Information Content per bp:1.872
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif26.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets67.9 +/- 17.1bp
Average Position of motif in Background55.1 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AGCAATGGGCAGC
---TNNGGGCAG-
 G T C A A C T G G T A C C G T A C T G A C G A T C T A G A C T G C T A G G T A C C G T A A C T G A G T C
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AGCAATGGGCAGC
--CAAAGGTCAG-
 G T C A A C T G G T A C C G T A C T G A C G A T C T A G A C T G C T A G G T A C C G T A A C T G A G T C
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGCAATGGGCAGC
---NGTGGGCAT-
 G T C A A C T G G T A C C G T A C T G A C G A T C T A G A C T G C T A G G T A C C G T A A C T G A G T C
A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGCAATGGGCAGC
TAGGGCAAAGGTCA--
 A C G T A C G T A C G T G T C A A C T G G T A C C G T A C T G A C G A T C T A G A C T G C T A G G T A C C G T A A C T G A G T C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGCAATGGGCAGC---
NNNNTTGGGCACNNCN
 G T C A A C T G G T A C C G T A C T G A C G A T C T A G A C T G C T A G G T A C C G T A A C T G A G T C A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCAATGGGCAGC
TCACCTCTGGGCAG-
 A C G T A C G T G T C A A C T G G T A C C G T A C T G A C G A T C T A G A C T G C T A G G T A C C G T A A C T G A G T C
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.56
Offset:9
Orientation:forward strand
Alignment:AGCAATGGGCAGC-
---------CAGCC
 G T C A A C T G G T A C C G T A C T G A C G A T C T A G A C T G C T A G G T A C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGCAATGGGCAGC
GTAGGGCAAAGGTCA--
 A C G T A C G T A C G T A C G T G T C A A C T G G T A C C G T A C T G A C G A T C T A G A C T G C T A G G T A C C G T A A C T G A G T C
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGCAATGGGCAGC
TGGGGCAAAGGTCA--
 A C G T A C G T A C G T G T C A A C T G G T A C C G T A C T G A C G A T C T A G A C T G C T A G G T A C C G T A A C T G A G T C
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGCAATGGGCAGC-----------
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T G T C A A C T G G T A C C G T A C T G A C G A T C T A G A C T G C T A G G T A C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T