Information for 10-TCCATWTGAAWTG (Motif 9)

A C G T A G T C A G T C C G T A A C G T C G A T A C G T A C T G C T G A C G T A C G T A A C G T C T A G
Reverse Opposite:
A G T C C G T A C G A T A C G T A G C T A G T C C G T A C G T A C G T A A C G T A C T G C T A G C G T A
p-value:1e-9
log p-value:-2.135e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 31.2bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TCCATWTGAAWTG
---ATTTGAATT-
 A C G T A G T C A G T C C G T A A C G T C G A T A C G T A C T G C T G A C G T A C G T A A C G T C T A G
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCCATWTGAAWTG
TAAGCCACTTGAATTT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G A T A C G T A C T G C T G A C G T A C G T A A C G T C T A G
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

Bhlha15/MA0607.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCCATWTGAAWTG
-CCATATGT----
 A C G T A G T C A G T C C G T A A C G T C G A T A C G T A C T G C T G A C G T A C G T A A C G T C T A G
A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCCATWTGAAWTG
ACCATATGTT---
 A C G T A G T C A G T C C G T A A C G T C G A T A C G T A C T G C T G A C G T A C G T A A C G T C T A G
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCCATWTGAAWTG
--CCTTTGAWGT-
 A C G T A G T C A G T C C G T A A C G T C G A T A C G T A C T G C T G A C G T A C G T A A C G T C T A G
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCCATWTGAAWTG
--CCTTTGATGT-
 A C G T A G T C A G T C C G T A A C G T C G A T A C G T A C T G C T G A C G T A C G T A A C G T C T A G
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCCATWTGAAWTG-
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G A T A C G T A C T G C T G A C G T A C G T A A C G T C T A G A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PH0171.1_Nkx2-1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCCATWTGAAWTG
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G A T A C G T A C T G C T G A C G T A C G T A A C G T C T A G
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TCCATWTGAAWTG-
----TTTGAAACCG
 A C G T A G T C A G T C C G T A A C G T C G A T A C G T A C T G C T G A C G T A C G T A A C G T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCCATWTGAAWTG
TNCCTTTGATGT-
 A C G T A G T C A G T C C G T A A C G T C G A T A C G T A C T G C T G A C G T A C G T A A C G T C T A G
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T