Information for 9-AGAAAAAGACTGT (Motif 6)

C T G A A C T G C T G A C G T A C G T A C G T A C T G A A C T G G C T A A G T C A C G T A T C G A C G T
Reverse Opposite:
G T C A A T G C G T C A A C T G C G A T G T A C A G C T G A C T C G A T A C G T A G C T A G T C G A C T
p-value:1e-10
log p-value:-2.436e+01
Information Content per bp:1.800
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.4 +/- 34.1bp
Average Position of motif in Background40.8 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.53
Offset:8
Orientation:forward strand
Alignment:AGAAAAAGACTGT-
--------GCTGTG
 C T G A A C T G C T G A C G T A C G T A C G T A C T G A A C T G G C T A A G T C A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAAAAAGACTGT--
VAGRACAKNCTGTBC
 C T G A A C T G C T G A C G T A C G T A C G T A C T G A A C T G G C T A A G T C A C G T A T C G A C G T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----AGAAAAAGACTGT
AAATAAGAAAAAAC----
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G C T G A C G T A C G T A C G T A C T G A A C T G G C T A A G T C A C G T A T C G A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGAAAAAGACTGT--
AAGAACATWHTGTTC
 C T G A A C T G C T G A C G T A C G T A C G T A C T G A A C T G G C T A A G T C A C G T A T C G A C G T A C G T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGAAAAAGACTGT
AGGAAACAGCTG-
 C T G A A C T G C T G A C G T A C G T A C G T A C T G A A C T G G C T A A G T C A C G T A T C G A C G T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGAAAAAGACTGT--
AGAAAGTGAAAGTGA
 C T G A A C T G C T G A C G T A C G T A C G T A C T G A A C T G G C T A A G T C A C G T A T C G A C G T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGAAAAAGACTGT
-GAAAGTGAAAGT
 C T G A A C T G C T G A C G T A C G T A C G T A C T G A A C T G G C T A A G T C A C G T A T C G A C G T
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AGAAAAAGACTGT
AATGGAAAAT------
 A C G T A C G T A C G T C T G A A C T G C T G A C G T A C G T A C G T A C T G A A C T G G C T A A G T C A C G T A T C G A C G T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AGAAAAAGACTGT
DCYAAAAATAGM----
 A C G T A C G T A C G T C T G A A C T G C T G A C G T A C G T A C G T A C T G A A C T G G C T A A G T C A C G T A T C G A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AGAAAAAGACTGT
TGGAAAA-------
 A C G T C T G A A C T G C T G A C G T A C G T A C G T A C T G A A C T G G C T A A G T C A C G T A T C G A C G T
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T