Information for 12-CTTTTTAAAAARG (Motif 14)

G A T C A G C T A C G T C G A T A C G T C G A T C G T A C G T A C G T A C G T A C T G A C T G A A T C G
Reverse Opposite:
T A G C G A C T A G C T A C G T C G A T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C T A G
p-value:1e-5
log p-value:-1.231e+01
Information Content per bp:1.785
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif83.4
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets61.3 +/- 22.4bp
Average Position of motif in Background50.1 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTTAAAAARG
NNNTTTNTAATACNG
 A C G T A C G T G A T C A G C T A C G T C G A T A C G T C G A T C G T A C G T A C G T A C G T A C T G A C T G A A T C G
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTTTTTAAAAARG
-NATTCAAAT---
 G A T C A G C T A C G T C G A T A C G T C G A T C G T A C G T A C G T A C G T A C T G A C T G A A T C G
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTTTTTAAAAARG
CGGTTTCAAA----
 A C G T G A T C A G C T A C G T C G A T A C G T C G A T C G T A C G T A C G T A C G T A C T G A C T G A A T C G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTTTTTAAAAARG-
AATATTAATAAAGA
 G A T C A G C T A C G T C G A T A C G T C G A T C G T A C G T A C G T A C G T A C T G A C T G A A T C G A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

Arid3b/MA0601.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTTTTTAAAAARG
NTAATTAATAT--
 G A T C A G C T A C G T C G A T A C G T C G A T C G T A C G T A C G T A C G T A C T G A C T G A A T C G
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTTTTTAAAAARG
--TTTTATTRGN-
 G A T C A G C T A C G T C G A T A C G T C G A T C G T A C G T A C G T A C G T A C T G A C T G A A T C G
A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTTTTAAAAARG
AAATAAGAAAAAAC
 A C G T G A T C A G C T A C G T C G A T A C G T C G A T C G T A C G T A C G T A C G T A C T G A C T G A A T C G
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTTTTAAAAARG
NGCAATTAAA----
 A C G T G A T C A G C T A C G T C G A T A C G T C G A T C G T A C G T A C G T A C G T A C T G A C T G A A T C G
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTTTTTAAAAARG----
GTTAAAAAAAAAAATTA
 G A T C A G C T A C G T C G A T A C G T C G A T C G T A C G T A C G T A C G T A C T G A C T G A A T C G A C G T A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0080.1_Tbp_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTTAAAAARG
NANTTATATATAANGN
 A C G T A C G T A C G T G A T C A G C T A C G T C G A T A C G T C G A T C G T A C G T A C G T A C G T A C T G A C T G A A T C G
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A