Information for 2-YTASSASAWWAATWAA (Motif 4)

A G C T C G A T C G T A T A C G A T C G C G T A T A G C C G T A C G A T C G A T C G T A C G T A A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T C G A T C G T A A C G T A C G T C G T A C G T A C G A T A T C G A C G T A T G C A T G C A C G T C G T A C T G A
p-value:1e-14
log p-value:-3.392e+01
Information Content per bp:1.804
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.4 +/- 23.2bp
Average Position of motif in Background42.8 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LMX1B/MA0703.1/Jaspar

Match Rank:1
Score:0.67
Offset:8
Orientation:forward strand
Alignment:YTASSASAWWAATWAA
--------TTAATTAA
 A G C T C G A T C G T A T A C G A T C G C G T A T A G C C G T A C G A T C G A T C G T A C G T A A C G T C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A

PH0095.1_Lhx5/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:forward strand
Alignment:YTASSASAWWAATWAA-----
----CGAATTAATTAAATACT
 A G C T C G A T C G T A T A C G A T C G C G T A T A G C C G T A C G A T C G A T C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

PH0101.1_Lmx1b/Jaspar

Match Rank:3
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:YTASSASAWWAATWAA-----
----NNAATTAATTAAAAANN
 A G C T C G A T C G T A T A C G A T C G C G T A T A G C C G T A C G A T C G A T C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T

PH0093.1_Lhx3/Jaspar

Match Rank:4
Score:0.66
Offset:4
Orientation:forward strand
Alignment:YTASSASAWWAATWAA-----
----GAAATTAATTAAATAAT
 A G C T C G A T C G T A T A C G A T C G C G T A T A G C C G T A C G A T C G A T C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C G A T G T C A T C G A G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A C G T A C G A T G T C A G T C A A C G T

PH0011.1_Alx1_2/Jaspar

Match Rank:5
Score:0.66
Offset:4
Orientation:forward strand
Alignment:YTASSASAWWAATWAA-----
----CGCATTAATTAATTGGC
 A G C T C G A T C G T A T A C G A T C G C G T A T A G C C G T A C G A T C G A T C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T C A G G T A C C T G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A A G C T A G C T C T A G C T A G T G A C

PH0069.1_Hoxc4/Jaspar

Match Rank:6
Score:0.66
Offset:4
Orientation:forward strand
Alignment:YTASSASAWWAATWAA-----
----CGAATTAATTAACAATA
 A G C T C G A T C G T A T A C G A T C G C G T A T A G C C G T A C G A T C G A T C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C T C A G G T C A C T G A G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A A G T C G C T A T G C A G C A T G T C A

PH0173.1_Uncx/Jaspar

Match Rank:7
Score:0.66
Offset:3
Orientation:forward strand
Alignment:YTASSASAWWAATWAA----
---CATAATTAATTAACGCG
 A G C T C G A T C G T A T A C G A T C G C G T A T A G C C G T A C G A T C G A T C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A G C A T C T G A T G C A A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G T C T A C G T A G C A C T G

LMX1A/MA0702.1/Jaspar

Match Rank:8
Score:0.66
Offset:8
Orientation:forward strand
Alignment:YTASSASAWWAATWAA
--------TTAATTAA
 A G C T C G A T C G T A T A C G A T C G C G T A T A G C C G T A C G A T C G A T C G T A C G T A A C G T C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T G A G C T A G C A T C G A T C T G A T C G A

PH0153.1_Prop1/Jaspar

Match Rank:9
Score:0.65
Offset:4
Orientation:forward strand
Alignment:YTASSASAWWAATWAA-----
----CGAATTAATTAAGAAAC
 A G C T C G A T C G T A T A C G A T C G C G T A T A G C C G T A C G A T C G A T C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C

PH0054.1_Hoxa7_1/Jaspar

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:YTASSASAWWAATWAA----
---GNNNATTAATTAANNCG
 A G C T C G A T C G T A T A C G A T C G C G T A T A G C C G T A C G A T C G A T C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G C A T G C A T C T G A C A G T G A C T G C T A C G T A G C A T C G A T C T G A G T C A G A T C C A G T A G T C A T C G