Information for 14-CTGGCAGRGA (Motif 26)

A T G C A C G T A C T G C T A G G T A C C T G A T A C G C T A G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A T G C G A C T C A T G G A T C A G T C T G C A A T C G
p-value:1e-8
log p-value:-2.010e+01
Information Content per bp:1.780
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif552.6
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets55.2 +/- 20.2bp
Average Position of motif in Background49.7 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CTGGCAGRGA---
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A T G C A C G T A C T G C T A G G T A C C T G A T A C G C T A G A C T G C G T A A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTGGCAGRGA
TTGGCA----
 A T G C A C G T A C T G C T A G G T A C C T G A T A C G C T A G A C T G C G T A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCAGRGA
NTTGGCANN--
 A C G T A T G C A C G T A C T G C T A G G T A C C T G A T A C G C T A G A C T G C G T A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCAGRGA
CTTGGCAA---
 A C G T A T G C A C G T A C T G C T A G G T A C C T G A T A C G C T A G A C T G C G T A
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTGGCAGRGA
CWGGCGGGAA
 A T G C A C G T A C T G C T A G G T A C C T G A T A C G C T A G A C T G C G T A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCAGRGA
TNNGGGCAG---
 A C G T A C G T A T G C A C G T A C T G C T A G G T A C C T G A T A C G C T A G A C T G C G T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTGGCAGRGA
GGTCTGGCAT---
 A C G T A C G T A C G T A T G C A C G T A C T G C T A G G T A C C T G A T A C G C T A G A C T G C G T A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGGCAGRGA-
-TGGAACAGMA
 A T G C A C G T A C T G C T A G G T A C C T G A T A C G C T A G A C T G C G T A A C G T
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTGGCAGRGA---
---GCAGTGATTT
 A T G C A C G T A C T G C T A G G T A C C T G A T A C G C T A G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGGCAGRGA---
-TGGCGGGAAAHB
 A T G C A C G T A C T G C T A G G T A C C T G A T A C G C T A G A C T G C G T A A C G T A C G T A C G T
A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G