Information for 10-CGGGTCATGA (Motif 22)

G T A C C T A G A C T G A T C G A C G T A T G C G T C A C G A T A C T G C G T A
Reverse Opposite:
A C G T G T A C C G T A A C G T A T C G G T C A A T G C A G T C A G T C A C T G
p-value:1e-9
log p-value:-2.177e+01
Information Content per bp:1.855
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.5 +/- 14.1bp
Average Position of motif in Background57.0 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----CGGGTCATGA-
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A C G T G T A C C T A G A C T G A T C G A C G T A T G C G T C A C G A T A C T G C G T A A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CGGGTCATGA
-AGGTCA---
 G T A C C T A G A C T G A T C G A C G T A T G C G T C A C G A T A C T G C G T A
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CGGGTCATGA-
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C G T A C G T G T A C C T A G A C T G A T C G A C G T A T G C G T C A C G A T A C T G C G T A A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGTCATGA--
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C G T G T A C C T A G A C T G A T C G A C G T A T G C G T C A C G A T A C T G C G T A A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CGGGTCATGA
---GTCATN-
 G T A C C T A G A C T G A T C G A C G T A T G C G T C A C G A T A C T G C G T A
A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGGGTCATGA
AGRGGTCA---
 A C G T G T A C C T A G A C T G A T C G A C G T A T G C G T C A C G A T A C T G C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CGGGTCATGA--
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T A C G T G T A C C T A G A C T G A T C G A C G T A T G C G T C A C G A T A C T G C G T A A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PH0073.1_Hoxc9/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGGGTCATGA-----
GGAGGTCATTAATTAT
 A C G T G T A C C T A G A C T G A T C G A C G T A T G C G T C A C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGGGTCATGA
TRAGGTCA---
 A C G T G T A C C T A G A C T G A T C G A C G T A T G C G T C A C G A T A C T G C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CGGGTCATGA--
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T G T A C C T A G A C T G A T C G A C G T A T G C G T C A C G A T A C T G C G T A A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A