Information for 5-CAGAGCTCCTTGAGCA (Motif 10)

A T G C C T G A A C T G G T C A C T A G G T A C C G A T A G T C G A T C A C G T G A C T T C A G T G C A A C T G A T G C C T G A
Reverse Opposite:
G A C T A T C G T A G C A C G T A G T C C G T A T G C A C T A G C T A G G C T A A C T G A G T C A C G T G T A C A G C T T A C G
p-value:1e-12
log p-value:-2.842e+01
Information Content per bp:1.685
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.9 +/- 28.8bp
Average Position of motif in Background74.1 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CAGAGCTCCTTGAGCA
CGAACAGTGCTCACTAT---
 A C G T A C G T A C G T A C G T A T G C C T G A A C T G G T C A C T A G G T A C C G A T A G T C G A T C A C G T G A C T T C A G T G C A A C T G A T G C C T G A
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T A C G T A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGAGCTCCTTGAGCA
-TGAACCCGATGACCC
 A T G C C T G A A C T G G T C A C T A G G T A C C G A T A G T C G A T C A C G T G A C T T C A G T G C A A C T G A T G C C T G A
A C G T A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CAGAGCTCCTTGAGCA
----GCTCCG------
 A T G C C T G A A C T G G T C A C T A G G T A C C G A T A G T C G A T C A C G T G A C T T C A G T G C A A C T G A T G C C T G A
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAGAGCTCCTTGAGCA
---GGCTCYAKCAYC-
 A T G C C T G A A C T G G T C A C T A G G T A C C G A T A G T C G A T C A C G T G A C T T C A G T G C A A C T G A T G C C T G A
A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGCTCCTTGAGCA--
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A T G C C T G A A C T G G T C A C T A G G T A C C G A T A G T C G A T C A C G T G A C T T C A G T G C A A C T G A T G C C T G A A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

POU6F2/MA0793.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CAGAGCTCCTTGAGCA
---AGCTCATTAT---
 A T G C C T G A A C T G G T C A C T A G G T A C C G A T A G T C G A T C A C G T G A C T T C A G T G C A A C T G A T G C C T G A
A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CAGAGCTCCTTGAGCA
--NAGGTCANTGACCT
 A T G C C T G A A C T G G T C A C T A G G T A C C G A T A G T C G A T C A C G T G A C T T C A G T G C A A C T G A T G C C T G A
A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CAGAGCTCCTTGAGCA
---NGCTN--------
 A T G C C T G A A C T G G T C A C T A G G T A C C G A T A G T C G A T C A C G T G A C T T C A G T G C A A C T G A T G C C T G A
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CAGAGCTCCTTGAGCA-
NNNACCTCATTATCNTN
 A T G C C T G A A C T G G T C A C T A G G T A C C G A T A G T C G A T C A C G T G A C T T C A G T G C A A C T G A T G C C T G A A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CAGAGCTCCTTGAGCA
GARTGGTCATCGCCC-
 A T G C C T G A A C T G G T C A C T A G G T A C C G A T A G T C G A T C A C G T G A C T T C A G T G C A A C T G A T G C C T G A
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T