Information for 11-AWCAWAAATCCAC (Motif 9)

C G T A C G A T A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C C G T A A G T C
Reverse Opposite:
A C T G C G A T C T A G A C T G C G T A A C G T A C G T A C G T C G A T A C G T A C T G C G T A A C G T
p-value:1e-11
log p-value:-2.700e+01
Information Content per bp:1.912
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.5 +/- 21.8bp
Average Position of motif in Background53.5 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:AWCAWAAATCCAC---
----SSAATCCACANN
 C G T A C G A T A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AWCAWAAATCCAC-
---TCCAATCCACA
 C G T A C G A T A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.64
Offset:7
Orientation:forward strand
Alignment:AWCAWAAATCCAC
-------ATCCAC
 C G T A C G A T A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

Hoxa9/MA0594.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AWCAWAAATCCAC
GCCATAAATCA--
 C G T A C G A T A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C C G T A A G T C
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AWCAWAAATCCAC
GGCCATAAATCA--
 A C G T C G T A C G A T A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C C G T A A G T C
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AWCAWAAATCCAC
GGCCATAAATCA--
 A C G T C G T A C G A T A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C C G T A A G T C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AWCAWAAATCCAC---
GGCAAAAGTCCAATAA
 C G T A C G A T A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AWCAWAAATCCAC
GGCCATAAATCAC-
 A C G T C G T A C G A T A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C C G T A A G T C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AWCAWAAATCCAC
NGYCATAAAWCH--
 A C G T C G T A C G A T A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C C G T A A G T C
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AWCAWAAATCCAC---
GNNNATTAATCCCTNCN
 A C G T C G T A C G A T A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A