Information for 7-ACTGCCAACA (Motif 19)

G T C A T G A C A G C T A C T G G T A C A G T C G T C A C T G A G A T C C T G A
Reverse Opposite:
G A C T C T A G A G C T A C G T A C T G A C T G G T A C C T G A A C T G C A G T
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.827
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.21%
Number of Background Sequences with motif339.2
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets52.0 +/- 25.3bp
Average Position of motif in Background46.2 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:forward strand
Alignment:ACTGCCAACA
GGTGCCAAGT
 G T C A T G A C A G C T A C T G G T A C A G T C G T C A C T G A G A T C C T G A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:ACTGCCAACA
--TGCCAA--
 G T C A T G A C A G C T A C T G G T A C A G T C G T C A C T G A G A T C C T G A
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:forward strand
Alignment:ACTGCCAACA
CGTGCCAAG-
 G T C A T G A C A G C T A C T G G T A C A G T C G T C A C T G A G A T C C T G A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.77
Offset:1
Orientation:forward strand
Alignment:ACTGCCAACA
-ATGCCAACC
 G T C A T G A C A G C T A C T G G T A C A G T C G T C A C T G A G A T C C T G A
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.77
Offset:1
Orientation:forward strand
Alignment:ACTGCCAACA
-TTGCCAAG-
 G T C A T G A C A G C T A C T G G T A C A G T C G T C A C T G A G A T C C T G A
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

Myb/MA0100.2/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---ACTGCCAACA
CCAACTGCCA---
 A C G T A C G T A C G T G T C A T G A C A G C T A C T G G T A C A G T C G T C A C T G A G A T C C T G A
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ACTGCCAACA
-CTGCCCGCA
 G T C A T G A C A G C T A C T G G T A C A G T C G T C A C T G A G A T C C T G A
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ACTGCCAACA----
ACTATGCCAACCTACC
 A C G T A C G T G T C A T G A C A G C T A C T G G T A C A G T C G T C A C T G A G A T C C T G A A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACTGCCAACA--
SCTGTCARCACC
 G T C A T G A C A G C T A C T G G T A C A G T C G T C A C T G A G A T C C T G A A C G T A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------ACTGCCAACA
CGACCAACTGCCATGC
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A T G A C A G C T A C T G G T A C A G T C G T C A C T G A G A T C C T G A
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C