Information for 2-MTGMMCTTTGYKYCYA (Motif 3)

G T C A A C G T A C T G G T A C G T A C A G T C C G A T A G C T A C G T A C T G A G C T A C G T A G T C A G T C A G T C C G T A
Reverse Opposite:
C G A T C T A G A C T G T C A G G T C A T C G A A G T C C G T A C T G A C G T A A C T G A C T G A C T G A G T C G T C A C A G T
p-value:1e-16
log p-value:-3.687e+01
Information Content per bp:1.815
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.6 +/- 23.1bp
Average Position of motif in Background25.8 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:MTGMMCTTTGYKYCYA
-TGGACTTTGNNCTCN
 G T C A A C G T A C T G G T A C G T A C A G T C C G A T A G C T A C G T A C T G A G C T A C G T A G T C A G T C A G T C C G T A
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:MTGMMCTTTGYKYCYA-
-TGGACTTTGNNCTNTG
 G T C A A C G T A C T G G T A C G T A C A G T C C G A T A G C T A C G T A C T G A G C T A C G T A G T C A G T C A G T C C G T A A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:MTGMMCTTTGYKYCYA
CTGACCTTTG------
 G T C A A C G T A C T G G T A C G T A C A G T C C G A T A G C T A C G T A C T G A G C T A C G T A G T C A G T C A G T C C G T A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:MTGMMCTTTGYKYCYA
-TGACCTTTGCCCCA-
 G T C A A C G T A C T G G T A C G T A C A G T C C G A T A G C T A C G T A C T G A G C T A C G T A G T C A G T C A G T C C G T A
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T

RXRB/MA0855.1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:MTGMMCTTTGYKYCYA
-TGACCTTTGACCCC-
 G T C A A C G T A C T G G T A C G T A C A G T C C G A T A G C T A C G T A C T G A G C T A C G T A G T C A G T C A G T C C G T A
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.68
Offset:4
Orientation:forward strand
Alignment:MTGMMCTTTGYKYCYA
----YCTTTGTTCC--
 G T C A A C G T A C T G G T A C G T A C A G T C C G A T A G C T A C G T A C T G A G C T A C G T A G T C A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:MTGMMCTTTGYKYCYA
-TGACCTTTGACCCC-
 G T C A A C G T A C T G G T A C G T A C A G T C C G A T A G C T A C G T A C T G A G C T A C G T A G T C A G T C A G T C C G T A
A C G T A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T

Rxra/MA0512.2/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:MTGMMCTTTGYKYCYA
-TGACCTTTGACCCC-
 G T C A A C G T A C T G G T A C G T A C A G T C C G A T A G C T A C G T A C T G A G C T A C G T A G T C A G T C A G T C C G T A
A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:MTGMMCTTTGYKYCYA
-TGACCTTTNCNT---
 G T C A A C G T A C T G G T A C G T A C A G T C C G A T A G C T A C G T A C T G A G C T A C G T A G T C A G T C A G T C C G T A
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---MTGMMCTTTGYKYCYA
NNNGTGACCTTTGNNN---
 A C G T A C G T A C G T G T C A A C G T A C T G G T A C G T A C A G T C C G A T A G C T A C G T A C T G A G C T A C G T A G T C A G T C A G T C C G T A
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T A C G T A C G T